RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 DPYDQ12882 1025 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 ECM1Q16610 540 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 CCDC62Q6P9F0 684 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 MIER3Q7Z3K6 550 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 DPP9Q86TI2 863 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
HMG20A-206ENST00000558845 C7orf25Q9BPX7 421 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 GTPBP4Q9BZE4 634 aaKnown RBP12.53□□□□□ -0.4
HMG20A-206ENST00000558845 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 JPH1Q9HDC5 661 aaPredicted RBP12.53□□□□□ -0.4
HMG20A-206ENST00000558845 GJD2Q9UKL4 321 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 BOLA1Q9Y3E2 137 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
HMG20A-206ENST00000558845 DKC1O60832 514 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMG20A-206ENST00000558845 CCNE2O96020 404 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
HMG20A-206ENST00000558845 RGS2P41220 211 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 FCGRTP55899 365 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
HMG20A-206ENST00000558845 TYRO3Q06418 890 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 PNOCQ13519 176 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 KCNB1Q14721 858 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 STX1AQ16623 288 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 CT47A1Q5JQC4 288 aaPredicted RBP12.52□□□□□ -0.41
HMG20A-206ENST00000558845 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 SV2BQ7L1I2 683 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 SCFD2Q8WU76 684 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 APBA2Q99767 749 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 ABHD16BQ9H3Z7 469 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 ANO10Q9NW15 660 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.52□□□□□ -0.41
HMG20A-206ENST00000558845 SAGE1Q9NXZ1 904 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 SLC9A2Q9UBY0 812 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 DDX41Q9UJV9 622 aaKnown RBP12.52□□□□□ -0.41
HMG20A-206ENST00000558845 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.41
HMG20A-206ENST00000558845 LOXHD1Q8IVV2 1947 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 IGKV6D-21A0A0A0MT36 114 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 PVALEFA0A1B0GWK0 134 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 FOXN1O15353 648 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 FARP2O94887 1054 aaPredicted RBP12.51□□□□□ -0.41
HMG20A-206ENST00000558845 EYA4O95677 639 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
HMG20A-206ENST00000558845 UBA1P22314 1058 aaKnown RBP12.51□□□□□ -0.41
HMG20A-206ENST00000558845 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
HMG20A-206ENST00000558845 VEGFBP49765 207 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 SP2Q02086 613 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 KCNK18Q7Z418 384 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
HMG20A-206ENST00000558845 NPLOC4Q8TAT6 608 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
HMG20A-206ENST00000558845 NACC1Q96RE7 527 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 TRIM9Q9C026 710 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 ZSWIM4Q9H7M6 989 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 KCND2Q9NZV8 630 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 DNM3Q9UQ16 869 aa12.51□□□□□ -0.41
HMG20A-206ENST00000558845 TNPO2O14787 897 aaKnown RBP12.5□□□□□ -0.41
HMG20A-206ENST00000558845 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
HMG20A-206ENST00000558845 CHMP2AO43633 222 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 PSAPP07602 524 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 AFMP43652 599 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 SLC12A3P55017 1021 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 NLRP12P59046 1061 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 PSMC5P62195 406 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 GRM1Q13255 1194 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 MORC3Q14149 939 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 CELF3Q5SZQ8 465 aaKnown RBP12.5□□□□□ -0.41
HMG20A-206ENST00000558845 TAPT1Q6NXT6 567 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 GAS2L3Q86XJ1 694 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 DYDC2Q96IM9 177 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 LXNQ9BS40 222 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 RMND1Q9NWS8 449 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 RGL1Q9NZL6 768 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 DBR1Q9UK59 544 aaKnown RBP12.5□□□□□ -0.41
HMG20A-206ENST00000558845 MGAMO43451 1857 aa12.5□□□□□ -0.41
HMG20A-206ENST00000558845 IGSF9BQ9UPX0 1349 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
HMG20A-206ENST00000558845 KLRC4O43908 158 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 ARIH2O95376 493 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 GNRH1P01148 92 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 PLA2G4BP0C869 781 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 CTGFP29279 349 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 ACTR2P61160 394 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 SP3Q02447 781 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 CUL4BQ13620 913 aa12.49□□□□□ -0.41
HMG20A-206ENST00000558845 MCM6Q14566 821 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms