RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 GH1P01241 217 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 ATP2A2P16615 1042 aaKnown RBP17.62■□□□□ 0.41
LINC01220-201ENST00000558575 CYP3A7P24462 503 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 ZNF76P36508 570 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 MTMR1Q13613 665 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
LINC01220-201ENST00000558575 NIPA1Q7RTP0 329 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 AFG1LQ8WV93 481 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 EMID1Q96A84 441 aaPredicted RBP17.62■□□□□ 0.41
LINC01220-201ENST00000558575 MBOAT7Q96N66 472 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 SENP7Q9BQF6 1050 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 NOC4LQ9BVI4 516 aaKnown RBP17.62■□□□□ 0.41
LINC01220-201ENST00000558575 SIP14410 1827 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
LINC01220-201ENST00000558575 SPTBN4Q9H254 2564 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 TRIP12Q14669 1992 aaPredicted RBP17.61■□□□□ 0.41
LINC01220-201ENST00000558575 CCDC194A0A1B0GVG4 234 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 WNT7AO00755 349 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 TDP2O95551 362 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
LINC01220-201ENST00000558575 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 HSDL1Q3SXM5 330 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 CYFIP1Q7L576 1253 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 PLA2G4DQ86XP0 818 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
LINC01220-201ENST00000558575 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 AGO4Q9HCK5 861 aaKnown RBP17.61■□□□□ 0.41
LINC01220-201ENST00000558575 PKD2L1Q9P0L9 805 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 ZDBF2Q9HCK1 2354 aa17.61■□□□□ 0.41
LINC01220-201ENST00000558575 ZBBXA8MT70 800 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 DHX15O43143 795 aaKnown RBP17.6■□□□□ 0.41
LINC01220-201ENST00000558575 U2AF2P26368 475 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC01220-201ENST00000558575 PRR16Q569H4 304 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 LARP1BQ659C4 914 aaKnown RBP17.6■□□□□ 0.41
LINC01220-201ENST00000558575 SPRED2Q7Z698 418 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 SCLYQ96I15 445 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
LINC01220-201ENST00000558575 SPC25Q9HBM1 224 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 MYH7BA7E2Y1 1941 aa17.6■□□□□ 0.41
LINC01220-201ENST00000558575 TRIOO75962 3097 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 GRIN2DO15399 1336 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
LINC01220-201ENST00000558575 NEDD9Q14511 834 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 SAFBQ15424 915 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC01220-201ENST00000558575 Q4G0T1 1027 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 METTL7BQ6UX53 244 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 CXCL17Q6UXB2 119 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 NEK8Q86SG6 692 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 ARNTL2Q8WYA1 636 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 CDHR1Q96JP9 859 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 KIF3AQ9Y496 699 aa17.59■□□□□ 0.41
LINC01220-201ENST00000558575 MSH4O15457 936 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 LPXNO60711 386 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 MMP3P08254 477 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 TAP1Q03518 808 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 GRB10Q13322 594 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 GJA10Q969M2 543 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 FBXL18Q96ME1 805 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 SPATA33Q96N06 139 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 TRPV6Q9H1D0 765 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
LINC01220-201ENST00000558575 GSTTP1A0A1W2PQM5 241 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 SLC37A4O43826 429 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 B4GALT4O60513 344 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 SYT1P21579 422 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 CPT1AP50416 773 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 PURAQ00577 322 aaKnown RBP17.57■□□□□ 0.4
LINC01220-201ENST00000558575 PPP4R3AQ6IN85 833 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 NOSTRINQ8IVI9 506 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 KAT2BQ92831 832 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 GPR20Q99678 358 aa17.57■□□□□ 0.4
LINC01220-201ENST00000558575 NFASCO94856 1347 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
LINC01220-201ENST00000558575 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 CCNE2O96020 404 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 MYL3P08590 195 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
LINC01220-201ENST00000558575 FAM178BQ8IXR5 827 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 RPUSD2Q8IZ73 545 aaKnown RBP17.56■□□□□ 0.4
LINC01220-201ENST00000558575 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
LINC01220-201ENST00000558575 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 ZNF577Q9BSK1 485 aa17.56■□□□□ 0.4
LINC01220-201ENST00000558575 DDX25Q9UHL0 483 aaKnown RBP17.56■□□□□ 0.4
LINC01220-201ENST00000558575 USP34Q70CQ2 3546 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 H3BQV1 296 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 ZEB2O60315 1214 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 CCNT1O60563 726 aaKnown RBP17.55■□□□□ 0.4
LINC01220-201ENST00000558575 PSMC6P62333 389 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 SETQ01105 290 aaPredicted RBP17.55■□□□□ 0.4
LINC01220-201ENST00000558575 SP4Q02446 784 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 GJD3Q8N144 294 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms