RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 NBR1Q14596 966 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 PTGISQ16647 500 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 TTC38Q5R3I4 469 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
LRRC28-206ENST00000558471 AFAP1L1Q8TED9 768 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 MTMR9Q96QG7 549 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 TMEM60Q9H2L4 133 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 ZNF302Q9NR11 478 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 SETD4Q9NVD3 440 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 VAV3Q9UKW4 847 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 NOL7Q9UMY1 257 aaKnown RBP14.1□□□□□ -0.15
LRRC28-206ENST00000558471 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-206ENST00000558471 EML1O00423 815 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 BAG4O95429 457 aaKnown RBP14.09□□□□□ -0.15
LRRC28-206ENST00000558471 TIMP1P01033 207 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 RAG1P15918 1043 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 ATP4AP20648 1035 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 HOXC8P31273 242 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 SFNP31947 248 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 MDM2Q00987 491 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-206ENST00000558471 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 PLCB4Q15147 1175 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 CALCRLQ16602 461 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 FAM160B1Q5W0V3 765 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 MIER3Q7Z3K6 550 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 BADQ92934 168 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 NOC4LQ9BVI4 516 aaKnown RBP14.09□□□□□ -0.15
LRRC28-206ENST00000558471 PPP1R12CQ9BZL4 782 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 GABBR1Q9UBS5 961 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 NOD1Q9Y239 953 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 PCDHB6Q9Y5E3 794 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 MAFBQ9Y5Q3 323 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-206ENST00000558471 UMODL1Q5DID0 1318 aa14.09□□□□□ -0.15
LRRC28-206ENST00000558471 TREHO43280 583 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 HSP90AA1P07900 732 aaKnown RBP14.08□□□□□ -0.16
LRRC28-206ENST00000558471 INSRRP14616 1297 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 CYP2C18P33260 490 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 TXKP42681 527 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 MAGEA10P43363 369 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-206ENST00000558471 SLC26A2P50443 739 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 JAK3P52333 1124 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 ADAM17P78536 824 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 SPIRE1Q08AE8 756 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 ORC2Q13416 577 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-206ENST00000558471 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 C4orf32Q8N8J7 132 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 SPRYD3Q8NCJ5 442 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 RDM1Q8NG50 284 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 ATP6V0A1Q93050 837 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 GDF15Q99988 308 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 LBHD1Q9BQE6 289 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-206ENST00000558471 HIPK3Q9H422 1215 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 TTC12Q9H892 705 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-206ENST00000558471 PCDHA12Q9UN75 941 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 NRCAMQ92823 1304 aa14.08□□□□□ -0.16
LRRC28-206ENST00000558471 EVPLQ92817 2033 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 POTEB3A0JP26 581 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 GNAT1P11488 350 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 GRIK4Q16099 956 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 UGCGQ16739 394 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 RILPL1Q5EBL4 403 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 POTEBQ6S5H4 581 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 TRMT1LQ7Z2T5 733 aaKnown RBP14.07□□□□□ -0.16
LRRC28-206ENST00000558471 FERMT3Q86UX7 667 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 ATP8B4Q8TF62 1192 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 DHX38Q92620 1227 aaKnown RBP14.07□□□□□ -0.16
LRRC28-206ENST00000558471 WNT8BQ93098 351 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 MTMR6Q9Y217 621 aa14.07□□□□□ -0.16
LRRC28-206ENST00000558471 STX6O43752 255 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 ZNF862O60290 1169 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 HBP1O60381 514 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 CCL23P55773 120 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 IGBP1P78318 339 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 PTK7Q13308 1070 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 EPHA7Q15375 998 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 NCAPH2Q6IBW4 605 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 MFSD5Q6N075 450 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 SERINC5Q86VE9 423 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 CKAP2LQ8IYA6 745 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 TRAPPC12Q8WVT3 735 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 TNPO1Q92973 898 aaKnown RBP14.06□□□□□ -0.16
LRRC28-206ENST00000558471 WNT8AQ9H1J5 351 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.06□□□□□ -0.16
LRRC28-206ENST00000558471 SCN5AQ14524 2016 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
LRRC28-206ENST00000558471 RRN3P2A6NIE6 340 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 TECP42680 631 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 PTGDRQ13258 359 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 BFSP2Q13515 415 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
LRRC28-206ENST00000558471 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 BANK1Q8NDB2 785 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms