RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-205ENST00000558428 SWSAP1Q6NVH7 229 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 PLPPR4Q7Z2D5 763 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 CCDC60Q8IWA6 550 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-205ENST00000558428 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
SMAD3-205ENST00000558428 NOC4LQ9BVI4 516 aaKnown RBP13.95□□□□□ -0.18
SMAD3-205ENST00000558428 ZNF302Q9NR11 478 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 DISC1Q9NRI5 854 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 SETD4Q9NVD3 440 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
SMAD3-205ENST00000558428 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-205ENST00000558428 UMODL1Q5DID0 1318 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 NEMFO60524 1076 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
SMAD3-205ENST00000558428 GNAT1P11488 350 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 SFNP31947 248 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 MCM7P33993 719 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 JAK3P52333 1124 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 BFSP2Q13515 415 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 HIC1Q14526 733 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 PLCB4Q15147 1175 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 CALCRLQ16602 461 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 MFSD5Q6N075 450 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 PDXDC2PQ6P474 469 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 HAS1Q92839 578 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 TNPO1Q92973 898 aaKnown RBP13.94□□□□□ -0.18
SMAD3-205ENST00000558428 ATP6V0A1Q93050 837 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 CTAGE1Q96RT6 745 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 UBE2OQ9C0C9 1292 aaKnown RBP13.94□□□□□ -0.18
SMAD3-205ENST00000558428 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
SMAD3-205ENST00000558428 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 TREHO43280 583 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 HOXC8P31273 242 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 TRAPPC10P48553 1259 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 SLC26A2P50443 739 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 CCL23P55773 120 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 FPGSQ05932 587 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 PTK7Q13308 1070 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 GRIK4Q16099 956 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 TTC38Q5R3I4 469 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 CKAP2LQ8IYA6 745 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 SLFN12Q8IYM2 578 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 TMEM199Q8N511 208 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 CAGE1Q8TC20 777 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
SMAD3-205ENST00000558428 PRO3102Q9H379 93 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 GABBR1Q9UBS5 961 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-205ENST00000558428 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 TANC1Q9C0D5 1861 aa13.93□□□□□ -0.18
SMAD3-205ENST00000558428 EVPLQ92817 2033 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 VPS37CA5D8V6 355 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-205ENST00000558428 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
SMAD3-205ENST00000558428 PDCP20941 246 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 BMP8BP34820 402 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 IGBP1P78318 339 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 PPP2R5CQ13362 524 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 ZNF174Q15697 407 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 B3GNT9Q6UX72 402 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
SMAD3-205ENST00000558428 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 SCLYQ96I15 445 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 TMEM60Q9H2L4 133 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 VAV3Q9UKW4 847 aa13.92□□□□□ -0.18
SMAD3-205ENST00000558428 IGSF9BQ9UPX0 1349 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 RRN3P2A6NIE6 340 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 EML1O00423 815 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 HBP1O60381 514 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 INSRRP14616 1297 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 CSF2RAP15509 400 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 ATP4AP20648 1035 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 TXKP42681 527 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 ADAM17P78536 824 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 ORC2Q13416 577 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-205ENST00000558428 PPIGQ13427 754 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMAD3-205ENST00000558428 NBR1Q14596 966 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 UGCGQ16739 394 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 WNT8BQ93098 351 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 TUBE1Q9UJT0 475 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 TET1Q8NFU7 2136 aa13.91□□□□□ -0.18
SMAD3-205ENST00000558428 LAMA3Q16787 3333 aa13.9□□□□□ -0.18
SMAD3-205ENST00000558428 CKBP12277 381 aa13.9□□□□□ -0.18
SMAD3-205ENST00000558428 TOB1P50616 345 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-205ENST00000558428 PRKCEQ02156 737 aa13.9□□□□□ -0.18
SMAD3-205ENST00000558428 RBL2Q08999 1139 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms