RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 TUBE1Q9UJT0 475 aa12.27□□□□□ -0.45
SHF-203ENST00000558294 UBIAD1Q9Y5Z9 338 aa12.27□□□□□ -0.45
SHF-203ENST00000558294 CDY2AQ9Y6F7 541 aa12.27□□□□□ -0.45
SHF-203ENST00000558294 MMP1P03956 469 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 GNAQP50148 359 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
SHF-203ENST00000558294 MTMR1Q13613 665 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 BTG3Q14201 252 aaPredicted RBP12.26□□□□□ -0.45
SHF-203ENST00000558294 TSHZ1Q6ZSZ6 1077 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
SHF-203ENST00000558294 CMTR1Q8N1G2 835 aaKnown RBP12.26□□□□□ -0.45
SHF-203ENST00000558294 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 MTA3Q9BTC8 594 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 PLVAPQ9BX97 442 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 SMARCAD1Q9H4L7 1026 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
SHF-203ENST00000558294 AGO3Q9H9G7 860 aaKnown RBP12.26□□□□□ -0.45
SHF-203ENST00000558294 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
SHF-203ENST00000558294 KIAA1671Q9BY89 1806 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 TTC3P53804 2025 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 SH2B2O14492 632 aaPredicted RBP12.25□□□□□ -0.45
SHF-203ENST00000558294 PRC1O43663 620 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 DGKIO75912 1065 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 RXRAP19793 462 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 CD52P31358 61 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 MRPS6P82932 125 aaKnown RBP12.25□□□□□ -0.45
SHF-203ENST00000558294 CAMK1Q14012 370 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 COL9A3Q14050 684 aaPredicted RBP12.25□□□□□ -0.45
SHF-203ENST00000558294 SMAD2Q15796 467 aaKnown RBP12.25□□□□□ -0.45
SHF-203ENST00000558294 UBE2SQ16763 222 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 GLG1Q92896 1179 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 ZBTB10Q96DT7 871 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 UIMC1Q96RL1 719 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 PCYT2Q99447 389 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 JADE2Q9NQC1 790 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 C5orf42Q9H799 3197 aa12.25□□□□□ -0.45
SHF-203ENST00000558294 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 MAFGO15525 162 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 MBTPS2O43462 519 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 TBX10O75333 385 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 RPLP2P05387 115 aaKnown RBP12.24□□□□□ -0.45
SHF-203ENST00000558294 INSRRP14616 1297 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 MCM5P33992 734 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHF-203ENST00000558294 IRS1P35568 1242 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 IGBP1P78318 339 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 CLUL1Q15846 466 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 NFXL1Q6ZNB6 911 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 RTN4RL1Q86UN2 441 aaPredicted RBP12.24□□□□□ -0.45
SHF-203ENST00000558294 CMTR2Q8IYT2 770 aaKnown RBP12.24□□□□□ -0.45
SHF-203ENST00000558294 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 P2RX5Q93086 422 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 FAM49AQ9H0Q0 323 aaPredicted RBP12.24□□□□□ -0.45
SHF-203ENST00000558294 ALG13Q9NP73 1137 aaKnown RBP12.24□□□□□ -0.45
SHF-203ENST00000558294 PCDHA6Q9UN73 950 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 PLAGL2Q9UPG8 496 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 PCDHA8Q9Y5H6 950 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 MRPL42Q9Y6G3 142 aaKnown RBP12.24□□□□□ -0.45
SHF-203ENST00000558294 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
SHF-203ENST00000558294 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 LINC01565O15544 149 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 CSPG5O95196 566 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 CALM1P0DP23 149 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 CALM2P0DP24 149 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 CALM3P0DP25 149 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 DNAJB1P25685 340 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 LIFRP42702 1097 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 ADAM15Q13444 863 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 SMAD4Q13485 552 aaKnown RBP12.23□□□□□ -0.45
SHF-203ENST00000558294 IER5Q5VY09 327 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 ALYREFQ86V81 257 aaKnown RBP12.23□□□□□ -0.45
SHF-203ENST00000558294 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 POP1Q99575 1024 aaKnown RBP12.23□□□□□ -0.45
SHF-203ENST00000558294 FTHL17Q9BXU8 183 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 UPF3BQ9BZI7 483 aaKnown RBP12.23□□□□□ -0.45
SHF-203ENST00000558294 IGFLR1Q9H665 355 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 JPH1Q9HDC5 661 aaPredicted RBP12.23□□□□□ -0.45
SHF-203ENST00000558294 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 TRPV2Q9Y5S1 764 aa12.23□□□□□ -0.45
SHF-203ENST00000558294 IGSF9BQ9UPX0 1349 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 LOXHD1Q8IVV2 1947 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 ITGB1P05556 798 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 NAALADL2Q58DX5 795 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
SHF-203ENST00000558294 TMTC3Q6ZXV5 915 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 SPPL3Q8TCT6 385 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 TRAPPC12Q8WVT3 735 aa12.22□□□□□ -0.45
SHF-203ENST00000558294 MSLNLQ96KJ4 702 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms