RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 LRRIQ1Q96JM4 1722 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 SLIT1O75093 1534 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 IRS4O14654 1257 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-205ENST00000558248 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
LRRC28-205ENST00000558248 AFF3P51826 1226 aaKnown RBP5.24□□□□□ -1.57
LRRC28-205ENST00000558248 NCKAP1LP55160 1127 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 SPOCD1Q6ZMY3 1216 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 LCNL1Q6ZST4 164 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 BRINP3Q76B58 766 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 IGDCC3Q8IVU1 814 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 PPIL6Q8IXY8 311 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 NPLOC4Q8TAT6 608 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 FRS2Q8WU20 508 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 LRRC59Q96AG4 307 aaKnown RBP5.24□□□□□ -1.57
LRRC28-205ENST00000558248 TSPAN17Q96FV3 270 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 SCYL1Q96KG9 808 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 SENP7Q9BQF6 1050 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 MTA3Q9BTC8 594 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 HOMER2Q9NSB8 354 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 TRPC5Q9UL62 973 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-205ENST00000558248 PCDHA5Q9Y5H7 936 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 TIMM13Q9Y5L4 95 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-205ENST00000558248 TMEM2Q9UHN6 1383 aa5.24□□□□□ -1.57
LRRC28-205ENST00000558248 RTEL1-TNFRSF6BF6WH68 1400 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 AHDC1Q5TGY3 1603 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 TBX1O43435 398 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 SCG5P05408 212 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 NCAM1P13591 858 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 ATF3P18847 181 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 LTBRP36941 435 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 GFRA1P56159 465 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 RAB33AQ14088 237 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 HSP90AA2PQ14568 343 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 RASA3Q14644 834 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 FBLN7Q53RD9 439 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 ACBD5Q5T8D3 534 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 CLEC4GQ6UXB4 293 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 KIAA0907Q7Z7F0 614 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 CELF2-AS1Q8N7Q2 184 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 ST13P5Q8NFI4 369 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 SH3TC2Q8TF17 1288 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 KCTD13Q8WZ19 329 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 DDX17Q92841 729 aaKnown RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 FEZ1Q99689 392 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 COA3Q9Y2R0 106 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 ERVK-7P63135 1459 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 PLEKHH2Q8IVE3 1493 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 TIAM1Q13009 1591 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 DIP2AQ14689 1571 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 TET3O43151 1660 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 ARID1BQ8NFD5 2236 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-205ENST00000558248 ABCC3O15438 1527 aa5.23□□□□□ -1.57
LRRC28-205ENST00000558248 NKTRP30414 1462 aaKnown RBP5.22□□□□□ -1.57
LRRC28-205ENST00000558248 ARHGAP35Q9NRY4 1499 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 MBD5Q9P267 1494 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 C22orf46C9J442 243 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 KLF4O43474 513 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 CAND2O75155 1236 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 WDHD1O75717 1129 aaPredicted RBP5.22□□□□□ -1.57
LRRC28-205ENST00000558248 NTRK1P04629 796 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 PPP2R2AP63151 447 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 EXOSC10Q01780 885 aaKnown RBP5.22□□□□□ -1.57
LRRC28-205ENST00000558248 MROH9Q5TGP6 573 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 MBLAC2Q68D91 279 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 C11orf96Q7Z7L8 435 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 FAM129CQ86XR2 697 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 TRMT2BQ96GJ1 504 aaKnown RBP5.22□□□□□ -1.57
LRRC28-205ENST00000558248 PWWP2AQ96N64 755 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 NAP1L4Q99733 375 aaKnown RBP5.22□□□□□ -1.57
LRRC28-205ENST00000558248 IER2Q9BTL4 223 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 PNMA2Q9UL42 364 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 BLMP54132 1417 aaPredicted RBP5.22□□□□□ -1.57
LRRC28-205ENST00000558248 SETD5Q9C0A6 1442 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 IRS2Q9Y4H2 1338 aa5.22□□□□□ -1.57
LRRC28-205ENST00000558248 NWD1Q149M9 1564 aa5.21□□□□□ -1.57
LRRC28-205ENST00000558248 CCDC189A1A4V9 331 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 GNALP38405 381 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 MAP4K2Q12851 820 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 IDI1Q13907 227 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 BRD3Q15059 726 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 CHRNA2Q15822 529 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 INF2Q27J81 1249 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 LRRC47Q8N1G4 583 aaKnown RBP5.21□□□□□ -1.58
LRRC28-205ENST00000558248 SAMD3Q8N6K7 520 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 SEC14L1Q92503 715 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 DACT3Q96B18 629 aaPredicted RBP5.21□□□□□ -1.58
LRRC28-205ENST00000558248 TMEM169Q96HH4 297 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 CHAMP1Q96JM3 812 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 ZCCHC4Q9H5U6 513 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 RXFP1Q9HBX9 757 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 FBLN5Q9UBX5 448 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 HCFC2Q9Y5Z7 792 aa5.21□□□□□ -1.58
LRRC28-205ENST00000558248 KDM5AP29375 1690 aaKnown RBP5.21□□□□□ -1.58
LRRC28-205ENST00000558248 PNPLA6Q8IY17 1366 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 CCNB3Q8WWL7 1395 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 A0A1W2PQU0 124 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 PPP1R11O60927 126 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-205ENST00000558248 SASH1O94885 1247 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms