RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 ANO10Q9NW15 660 aa8.16□□□□□ -1.1
MARK3-212ENST00000558223 OBP2AQ9NY56 170 aa8.16□□□□□ -1.1
MARK3-212ENST00000558223 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
MARK3-212ENST00000558223 SPEF1Q9Y4P9 236 aa8.16□□□□□ -1.1
MARK3-212ENST00000558223 LAMB2P55268 1798 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 FAM221AA4D161 298 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 GOLGA6L19H0YKK7 550 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 SPTLC2O15270 562 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 PRPF3O43395 683 aaKnown RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 NEMFO60524 1076 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 DEXIO95424 95 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 BAG3O95817 575 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 CMA1P23946 247 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 U2AF2P26368 475 aaKnown RBP eCLIP8.15□□□□□ -1.12e-7■■□□□ 11.5
MARK3-212ENST00000558223 ME1P48163 572 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 NEK3P51956 506 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 RBM6P78332 1123 aaKnown RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 PPARAQ07869 468 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 NCAPHQ15003 741 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 STX1AQ16623 288 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 SBK1Q52WX2 424 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 RILPL1Q5EBL4 403 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 ANO1Q5XXA6 986 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 CCDC70Q6NSX1 233 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 TEX19Q8NA77 164 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 LINC00301Q8NCQ3 95 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 JPH3Q8WXH2 748 aaPredicted RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 MAP3K14Q99558 947 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 PYM1Q9BRP8 204 aaKnown RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 DHRS4Q9BTZ2 278 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 RNF26Q9BY78 433 aaPredicted RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 INO80BQ9C086 356 aaPredicted RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 EPN3Q9H201 632 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 FOXP1Q9H334 677 aaPredicted RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 LY9Q9HBG7 655 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 ZSWIM5Q9P217 1185 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 ARPP21Q9UBL0 812 aaPredicted RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.1
MARK3-212ENST00000558223 PCDHB14Q9Y5E9 798 aa8.15□□□□□ -1.1
MARK3-212ENST00000558223 CFAP69A5D8W1 941 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 FAM177BA6PVY3 158 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 VSTM5A8MXK1 200 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 B4E1Z4 1266 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 ORC4O43929 436 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 CILPO75339 1184 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 TCEA3O75764 348 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 BBOX1O75936 387 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 CHGBP05060 677 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 GNAQP50148 359 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 KIF23Q02241 960 aaPredicted RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 PDE4BQ07343 736 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 GRAPQ13588 217 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 MAP7Q14244 749 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 SLC39A14Q15043 492 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 MEX3CQ5U5Q3 659 aaKnown RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 TBC1D9BQ66K14 1250 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 CXorf57Q6NSI4 855 aaKnown RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 VHLLQ6RSH7 139 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 TBC1D10CQ8IV04 446 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 CPXCR1Q8N123 301 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 ENAHQ8N8S7 591 aaPredicted RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 RNF214Q8ND24 703 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 TDRD7Q8NHU6 1098 aaKnown RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 GRAPLQ8TC17 118 aaPredicted RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 DDX1Q92499 740 aaKnown RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 PGBD1Q96JS3 809 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 FAM84BQ96KN1 310 aaPredicted RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 CLUHP3Q96NS8 147 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 USP28Q96RU2 1077 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 TCF12Q99081 682 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 BPIFA3Q9BQP9 254 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 SDF4Q9BRK5 362 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 ARMT1Q9H993 441 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 RRAGDQ9NQL2 400 aaPredicted RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 ABCF2Q9UG63 623 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 GPN3Q9UHW5 284 aaPredicted RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 SAMM50Q9Y512 469 aa8.14□□□□□ -1.11
MARK3-212ENST00000558223 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.14□□□□□ -1.11
MARK3-212ENST00000558223 AKAP11Q9UKA4 1901 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 BCORQ6W2J9 1755 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 XDHP47989 1333 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 FAM237AA0A1B0GTK4 181 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 SMTNL1A8MU46 457 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 BECN2A8MW95 431 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 AGRPO00253 132 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 GPR39O43194 453 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 BRINP1O60477 761 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 CUTAO60888 179 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 OFD1O75665 1012 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 ADCY5O95622 1261 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms