RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 TMEM8BA6NDV4 472 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 EIF4E1BA6NMX2 242 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 APAF1O14727 1248 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 ATP2A1O14983 1001 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 PER2O15055 1255 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 POLR3DP05423 398 aaPredicted RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 FBXO45P0C2W1 286 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 LINC00271P0C7V0 271 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 DNAJB1P25685 340 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 TECP42680 631 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 PLCD1P51178 756 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 DYNLL1P63167 89 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SEMA3FQ13275 785 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 RALBP1Q15311 655 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SOWAHCQ53LP3 525 aaPredicted RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SESTD1Q86VW0 696 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 CERS3Q8IU89 383 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SIAH1Q8IUQ4 282 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 TDRD5Q8NAT2 981 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 MICAL1Q8TDZ2 1067 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SEPT8Q92599 483 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 P2RX5Q93086 422 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 KCTD12Q96CX2 325 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 NEUROD6Q96NK8 337 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 NECTIN4Q96NY8 510 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 TRAIPQ9BWF2 469 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 ANTXR1Q9H6X2 564 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 RAVER2Q9HCJ3 691 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 TFIP11Q9UBB9 837 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 GMEB2Q9UKD1 530 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 SMG5Q9UPR3 1016 aaKnown RBP6.9□□□□□ -1.3
TRPM1-204ENST00000557948 AKAP2Q9Y2D5 859 aa6.9□□□□□ -1.3
TRPM1-204ENST00000557948 ITPR1Q14643 2758 aa6.9□□□□□ -1.31
TRPM1-204ENST00000557948 PLXNA4Q9HCM2 1894 aa6.9□□□□□ -1.31
TRPM1-204ENST00000557948 ITGB1P05556 798 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 MMP3P08254 477 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 TGM1P22735 817 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 CTHP32929 405 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 MCM5P33992 734 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 CCDC173Q0VFZ6 552 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 PTK7Q13308 1070 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 BTG3Q14201 252 aaPredicted RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 PTPRNQ16849 979 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 NAALADL2Q58DX5 795 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 PLEKHG4Q58EX7 1191 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 CES5AQ6NT32 575 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 ANKRD54Q6NXT1 300 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 TRAF7Q6Q0C0 670 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 THSD4Q6ZMP0 1018 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 ZSCAN30Q86W11 494 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 ZDHHC14Q8IZN3 488 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 VN1R2Q8NFZ6 395 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 SPPL3Q8TCT6 385 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 ANP32BQ92688 251 aaKnown RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 CDCA3Q99618 268 aaPredicted RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 SPSB2Q99619 263 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 ACAD9Q9H845 621 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 GRPEL1Q9HAV7 217 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 PARD6AQ9NPB6 346 aa6.89□□□□□ -1.31
TRPM1-204ENST00000557948 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 USP9XQ93008 2570 aaPredicted RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 SMG1Q96Q15 3661 aaKnown RBP6.89□□□□□ -1.31
TRPM1-204ENST00000557948 IGSF10Q6WRI0 2623 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.88□□□□□ -1.31
TRPM1-204ENST00000557948 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 RSPH10B2B2RC85 870 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 RSPH10BP0C881 870 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 EEF2P13639 858 aaKnown RBP6.88□□□□□ -1.31
TRPM1-204ENST00000557948 HOXB8P17481 243 aaPredicted RBP6.88□□□□□ -1.31
TRPM1-204ENST00000557948 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
TRPM1-204ENST00000557948 MCM4P33991 863 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 GABPAQ06546 454 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 NR1H3Q13133 447 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 TDGQ13569 410 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 DUSP6Q16828 381 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 IL31Q6EBC2 164 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 SYCE2Q6PIF2 218 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 C7orf31Q8N865 590 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 MIGA1Q8NAN2 632 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 PPP1R9BQ96SB3 815 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 POMKQ9H5K3 350 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 A1CFQ9NQ94 594 aaKnown RBP6.88□□□□□ -1.31
TRPM1-204ENST00000557948 GTF2IRD1Q9UHL9 959 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 NAP1L2Q9ULW6 460 aaPredicted RBP6.88□□□□□ -1.31
TRPM1-204ENST00000557948 PCDHGA2Q9Y5H1 932 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 LOC400499M0QZD8 3231 aa6.88□□□□□ -1.31
TRPM1-204ENST00000557948 POTEMA6NI47 508 aa6.87□□□□□ -1.31
TRPM1-204ENST00000557948 PIK3CDO00329 1044 aa6.87□□□□□ -1.31
TRPM1-204ENST00000557948 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRPM1-204ENST00000557948 VAMP4O75379 141 aa6.87□□□□□ -1.31
TRPM1-204ENST00000557948 DXOO77932 396 aaKnown RBP6.87□□□□□ -1.31
TRPM1-204ENST00000557948 DCNP07585 359 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms