RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ACTR2P61160 394 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 SAFBQ15424 915 aaKnown RBP eCLIP14.16□□□□□ -0.14
SLIRP-211ENST00000557623 Q4G0T1 1027 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 TMEM92Q6UXU6 159 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 NEK8Q86SG6 692 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 RETREG2Q8NC44 543 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 PPP1R13LQ8WUF5 828 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 GLG1Q92896 1179 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 TNPO1Q92973 898 aaKnown RBP14.16□□□□□ -0.14
SLIRP-211ENST00000557623 AZI2Q9H6S1 392 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 GJB4Q9NTQ9 266 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 ERAP1Q9NZ08 941 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 DDX39AO00148 427 aaKnown RBP14.15□□□□□ -0.14
SLIRP-211ENST00000557623 EDIL3O43854 480 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 LGR5O75473 907 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 ATG7O95352 703 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 SMIM10L2AP0DMW4 78 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 SMIM10L2BP0DMW5 78 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 CYP2C9P11712 490 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.14
SLIRP-211ENST00000557623 CYP2C18P33260 490 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 KRT76Q01546 638 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 INF2Q27J81 1249 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 KRT40Q6A162 431 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 ZNF746Q6NUN9 644 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-211ENST00000557623 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 TRIM50Q86XT4 487 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 SMAP1Q8IYB5 467 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-211ENST00000557623 LENG9Q96B70 501 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 TELO2Q9Y4R8 837 aa14.15□□□□□ -0.14
SLIRP-211ENST00000557623 SCN5AQ14524 2016 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
SLIRP-211ENST00000557623 SLC26A2P50443 739 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 STAT5BP51692 787 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 PTK7Q13308 1070 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 LETM2Q2VYF4 491 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 FAM160B1Q5W0V3 765 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 PPP4R3AQ6IN85 833 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 MIS18BP1Q6P0N0 1132 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 PLPPR4Q7Z2D5 763 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 DIS3L2Q8IYB7 885 aaKnown RBP14.14□□□□□ -0.15
SLIRP-211ENST00000557623 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
SLIRP-211ENST00000557623 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 ATP6V0A1Q93050 837 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 TMX3Q96JJ7 454 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 MBOAT7Q96N66 472 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 RIT2Q99578 217 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
SLIRP-211ENST00000557623 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
SLIRP-211ENST00000557623 IGKV6D-21A0A0A0MT36 114 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 MSH4O15457 936 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 GAS7O60861 476 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
SLIRP-211ENST00000557623 TDP2O95551 362 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 CCNE2O96020 404 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 PFKMP08237 780 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 CSF2RAP15509 400 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 HOXC8P31273 242 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 RFC2P35250 354 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 FOSBP53539 338 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 CCL23P55773 120 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 NR5A1Q13285 461 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 LRCH2Q5VUJ6 765 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 ABHD15Q6UXT9 468 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 AFAP1L1Q8TED9 768 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 TNFRSF25Q93038 417 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 TEKT3Q9BXF9 490 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 RNPEPQ9H4A4 650 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 IL23AQ9NPF7 189 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 UMODL1Q5DID0 1318 aa14.13□□□□□ -0.15
SLIRP-211ENST00000557623 BTBD18B2RXH4 712 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 BACH1O14867 736 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 CCNT1O60563 726 aaKnown RBP14.12□□□□□ -0.15
SLIRP-211ENST00000557623 CD2BP2O95400 341 aaKnown RBP14.12□□□□□ -0.15
SLIRP-211ENST00000557623 PSAPP07602 524 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 MARK3P27448 753 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 SFNP31947 248 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 RBL2Q08999 1139 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 SHHQ15465 462 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 LRIT3Q3SXY7 679 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 PSRC1Q6PGN9 363 aaPredicted RBP14.12□□□□□ -0.15
SLIRP-211ENST00000557623 SERINC5Q86VE9 423 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 FAM20AQ96MK3 541 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 CTAGE1Q96RT6 745 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 PCYT2Q99447 389 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 WNT8AQ9H1J5 351 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 ZNF302Q9NR11 478 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 SAMM50Q9Y512 469 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
SLIRP-211ENST00000557623 PCDHA10Q9Y5I2 948 aa14.12□□□□□ -0.15
SLIRP-211ENST00000557623 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
SLIRP-211ENST00000557623 RRN3P2A6NIE6 340 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms