RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SMAD2Q15796 467 aaKnown RBP6.29□□□□□ -1.4
PRPF39-212ENST00000557477 PLEKHN1Q494U1 663 aaPredicted RBP6.29□□□□□ -1.4
PRPF39-212ENST00000557477 CATSPEREQ5SY80 951 aa6.29□□□□□ -1.4
PRPF39-212ENST00000557477 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
PRPF39-212ENST00000557477 KLHL14Q9P2G3 628 aa6.29□□□□□ -1.4
PRPF39-212ENST00000557477 PLA2G2DQ9UNK4 145 aa6.29□□□□□ -1.4
PRPF39-212ENST00000557477 ERCC6Q03468 1493 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.28□□□□□ -1.4
PRPF39-212ENST00000557477 PRAMEF25A6NGN4 478 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 GJA4P35212 333 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 PDE6BP35913 854 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 SESN3P58005 492 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 NR1I3Q14994 352 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 ABCB5Q2M3G0 1257 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 CC2D1AQ6P1N0 951 aaPredicted RBP6.28□□□□□ -1.4
PRPF39-212ENST00000557477 ATG4DQ86TL0 474 aaPredicted RBP6.28□□□□□ -1.4
PRPF39-212ENST00000557477 TRIM48Q8IWZ4 208 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 CBARPQ8N350 705 aaPredicted RBP6.28□□□□□ -1.4
PRPF39-212ENST00000557477 TSPAN17Q96FV3 270 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 YIPF4Q9BSR8 244 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 SLC6A17Q9H1V8 727 aa6.28□□□□□ -1.4
PRPF39-212ENST00000557477 DCAF1Q9Y4B6 1507 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 K7ESF4 209 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 TMEM253P0C7T8 217 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 IARSP41252 1262 aaKnown RBP6.27□□□□□ -1.41
PRPF39-212ENST00000557477 MAPKAPK2P49137 400 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 PHC1P78364 1004 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 PAN2Q504Q3 1202 aaKnown RBP6.27□□□□□ -1.41
PRPF39-212ENST00000557477 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 CMIPQ8IY22 773 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 TTLL11Q8NHH1 800 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 AHCYL2Q96HN2 611 aaKnown RBP6.27□□□□□ -1.41
PRPF39-212ENST00000557477 PDGFDQ9GZP0 370 aaPredicted RBP6.27□□□□□ -1.41
PRPF39-212ENST00000557477 ACSS2Q9NR19 701 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 TOPORSQ9NS56 1045 aaPredicted RBP6.27□□□□□ -1.41
PRPF39-212ENST00000557477 C14orf119Q9NWQ9 140 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 EID1Q9Y6B2 187 aa6.27□□□□□ -1.41
PRPF39-212ENST00000557477 OR14I1A6ND48 311 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 FOXP2O15409 715 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 ZBTB7AO95365 584 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 CYP17A1P05093 508 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 MMEP08473 750 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 SDHAP31040 664 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 LSP1P33241 339 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 IRAK1P51617 712 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 NEK2P51955 445 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 MCL1Q07820 350 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 SLC9A5Q14940 896 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 ZC3H14Q6PJT7 736 aaKnown RBP6.26□□□□□ -1.41
PRPF39-212ENST00000557477 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 ZNF610Q8N9Z0 462 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 RTF1Q92541 710 aaKnown RBP6.26□□□□□ -1.41
PRPF39-212ENST00000557477 SCYL1Q96KG9 808 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 C16orf92Q96LL3 132 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 MENTQ9BUN1 341 aa6.26□□□□□ -1.41
PRPF39-212ENST00000557477 TNKSO95271 1327 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 BIN1O00499 593 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 MT-CO1P00395 513 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 GLI1P08151 1106 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 FAHP16930 419 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 THBS2P35442 1172 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 STAT5AP42229 794 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 YBX1P67809 324 aaKnown RBP6.25□□□□□ -1.41
PRPF39-212ENST00000557477 KCNMB1Q16558 191 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 INAVAQ3KP66 663 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 GPR158Q5T848 1215 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 RASSF3Q86WH2 238 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 MIB1Q86YT6 1006 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 ASB15Q8WXK1 588 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 DTLQ9NZJ0 730 aa6.25□□□□□ -1.41
PRPF39-212ENST00000557477 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.24□□□□□ -1.41
PRPF39-212ENST00000557477 KDM1AO60341 852 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 FBXO21O94952 628 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 PAPLNO95428 1278 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 LRG1P02750 347 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 FNTBP49356 437 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 EPHB1P54762 984 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 ZNF200P98182 395 aaPredicted RBP6.24□□□□□ -1.41
PRPF39-212ENST00000557477 KLF1Q13351 362 aaPredicted RBP6.24□□□□□ -1.41
PRPF39-212ENST00000557477 LRRC32Q14392 662 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 PDCD1Q15116 288 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 EPHA7Q15375 998 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 TMC6Q7Z403 805 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 IRF2BP1Q8IU81 584 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 FAM126BQ8IXS8 530 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 ALG3Q92685 438 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
PRPF39-212ENST00000557477 FOXRED1Q96CU9 486 aaPredicted RBP6.24□□□□□ -1.41
PRPF39-212ENST00000557477 GBP4Q96PP9 640 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 ZDHHC5Q9C0B5 715 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 SEMA4AQ9H3S1 761 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 RBPJLQ9UBG7 517 aa6.24□□□□□ -1.41
PRPF39-212ENST00000557477 NOC2LQ9Y3T9 749 aaKnown RBP6.24□□□□□ -1.41
PRPF39-212ENST00000557477 FZD9O00144 591 aa6.23□□□□□ -1.41
PRPF39-212ENST00000557477 MYBL2P10244 700 aa6.23□□□□□ -1.41
PRPF39-212ENST00000557477 CD40P25942 277 aa6.23□□□□□ -1.41
PRPF39-212ENST00000557477 AOAHP28039 575 aa6.23□□□□□ -1.41
PRPF39-212ENST00000557477 VIPR1P32241 457 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms