RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PSMD10O75832 226 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 CYP2C9P11712 490 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.56e-16■■■■■ 52.2
HNRNPC-232ENST00000557442 STAT5BP51692 787 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 FAM160B1Q5W0V3 765 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 PCYT2Q99447 389 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 HIPK3Q9H422 1215 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 NOL7Q9UMY1 257 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 PTPRSQ13332 1948 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 MYH11P35749 1972 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 C17orf102A2RUQ5 167 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 TBX3O15119 743 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 ATG7O95352 703 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 BAG4O95429 457 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 PSAPP07602 524 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 PDCP20941 246 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 SFNP31947 248 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 MCM7P33993 719 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 MAGEA10P43363 369 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 JAK3P52333 1124 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 CALCRLQ16602 461 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 BADQ92934 168 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 FAM20AQ96MK3 541 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 ZNF302Q9NR11 478 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 DISC1Q9NRI5 854 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 PCDHA10Q9Y5I2 948 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 UMODL1Q5DID0 1318 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 IGSF9BQ9UPX0 1349 aa11.94□□□□□ -0.5
HNRNPC-232ENST00000557442 IGKV6D-21A0A0A0MT36 114 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 TIMP1P01033 207 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 ITGB8P26012 769 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 TRAPPC10P48553 1259 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 SLC26A2P50443 739 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 ZNF200P98182 395 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 PPFIA1Q13136 1202 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 HIC1Q14526 733 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 SWSAP1Q6NVH7 229 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 PLPPR4Q7Z2D5 763 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 MIER3Q7Z3K6 550 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 CCDC155Q8N6L0 562 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 AFAP1L1Q8TED9 768 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 LMBR1Q8WVP7 490 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 HAS1Q92839 578 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 NOC4LQ9BVI4 516 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 SETD4Q9NVD3 440 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 GABBR1Q9UBS5 961 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 VAV3Q9UKW4 847 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 NRCAMQ92823 1304 aa11.93□□□□□ -0.5
HNRNPC-232ENST00000557442 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 GNAT1P11488 350 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 HOXC8P31273 242 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 CYP2C18P33260 490 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 IGBP1P78318 339 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 PPP2R5CQ13362 524 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 ORC2Q13416 577 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 NBR1Q14596 966 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 PLCB4Q15147 1175 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 ZNF174Q15697 407 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 GRIK4Q16099 956 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 TRMT1LQ7Z2T5 733 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 RDM1Q8NG50 284 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 CTAGE1Q96RT6 745 aa11.92□□□□□ -0.5
HNRNPC-232ENST00000557442 LAMA3Q16787 3333 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 TREHO43280 583 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 SYT1P21579 422 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 TXKP42681 527 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 CCL23P55773 120 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 FPGSQ05932 587 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 PTK7Q13308 1070 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 BFSP2Q13515 415 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 UGCGQ16739 394 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 RILPL1Q5EBL4 403 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 NCAPH2Q6IBW4 605 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 B3GNT9Q6UX72 402 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 SERINC5Q86VE9 423 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 TMEM199Q8N511 208 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 CAGE1Q8TC20 777 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 ATP8B4Q8TF62 1192 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms