RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	MICAL3	Q7RTP6	2002 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	CAND2	O75155	1236 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	LINC00271	P0C7V0	271 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	KIF5B	P33176	963 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	MCM5	P33992	734 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	SP4	Q02446	784 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	UBE2S	Q16763	222 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	MARCH8	Q5T0T0	291 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	CREB3L3	Q68CJ9	461 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	TYW1B	Q6NUM6	668 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	MYOCD	Q8IZQ8	938 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	SMARCC2	Q8TAQ2	1214 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	LZTS2	Q9BRK4	669 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	UBIAD1	Q9Y5Z9	338 aa		12.85	□□□□□ -0.35
HNRNPC-231	ENST00000557336	AMH	P03971	560 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	TCF7	P36402	384 aa	Predicted RBP	12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	ARHGAP4	P98171	946 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	MGAT3	Q09327	533 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	FUT2	Q10981	343 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	TMTC3	Q6ZXV5	915 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	RPAIN	Q86UA6	219 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	CCDC82	Q8N4S0	544 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	IL27	Q8NEV9	243 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	PTCD2	Q8WV60	388 aa	Known RBP	12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	SEPT8	Q92599	483 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	GPRASP2	Q96D09	838 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	ZBTB10	Q96DT7	871 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	TMEM87B	Q96K49	555 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	PCYT2	Q99447	389 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	EPHX3	Q9H6B9	360 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	PSTPIP2	Q9H939	334 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	EHMT1	Q9H9B1	1298 aa		12.84	□□□□□ -0.35
HNRNPC-231	ENST00000557336	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	NUDT7	P0C024	238 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	GNAQ	P50148	359 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	EPC2	Q52LR7	807 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CASC1	Q6TDU7	716 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	NLRX1	Q86UT6	975 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	SGMS1	Q86VZ5	419 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	TMTC2	Q8N394	836 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	FANCB	Q8NB91	859 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CYP2W1	Q8TAV3	490 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	OXER1	Q8TDS5	423 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	UBE2Z	Q9H832	354 aa	Predicted RBP	12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	NRCAM	Q92823	1304 aa		12.83	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CCDC69	A6NI79	296 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	UPP2	O95045	317 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	GNAT1	P11488	350 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	EXOSC10	Q01780	885 aa	Known RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	LPIN1	Q14693	890 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	COL19A1	Q14993	1142 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	NFXL1	Q6ZNB6	911 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CRIPAK	Q8N1N5	446 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	SEPT1	Q8WYJ6	367 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CUL5	Q93034	780 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	IFIH1	Q9BYX4	1025 aa	Known RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	RC3H2	Q9HBD1	1191 aa	Known RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	ZSWIM6	Q9HCJ5	1215 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	C11orf16	Q9NQ32	467 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	JADE2	Q9NQC1	790 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	SEC63	Q9UGP8	760 aa	Known RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	ZNF215	Q9UL58	517 aa	Predicted RBP	12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	BRPF3	Q9ULD4	1205 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	PCDHA6	Q9UN73	950 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	PCDHA8	Q9Y5H6	950 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	SI	P14410	1827 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336	COL4A6	Q14031	1691 aa		12.82	□□□□□ -0.36
HNRNPC-231	ENST00000557336		H3BNC9	293 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	ENPP3	O14638	875 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	ADAMTS3	O15072	1205 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CALM1	P0DP23	149 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CALM2	P0DP24	149 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CALM3	P0DP25	149 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	GHR	P10912	638 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	MARK3	P27448	753 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	EMP3	P54852	163 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CAMK2B	Q13554	666 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	GRIK4	Q16099	956 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	WWC2	Q6AWC2	1192 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	APOA5	Q6Q788	366 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	TMEM192	Q8IY95	271 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	LINC01599	Q8WXQ3	324 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	MRPL38	Q96DV4	380 aa	Known RBP	12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	AGO3	Q9H9G7	860 aa	Known RBP	12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	PKD2L1	Q9P0L9	805 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	SLC12A7	Q9Y666	1083 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	CNTNAP5	Q8WYK1	1306 aa		12.81	□□□□□ -0.36
HNRNPC-231	ENST00000557336	AR	P10275	920 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	PPFIA1	Q13136	1202 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	MTMR1	Q13613	665 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	ADCK5	Q3MIX3	580 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	LEXM	Q3ZCV2	418 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	FBXO47	Q5MNV8	452 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	HEATR3	Q7Z4Q2	680 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	MICU3	Q86XE3	530 aa		12.8	□□□□□ -0.36
HNRNPC-231	ENST00000557336	DNAJB3	Q8WWF6	145 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms