RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SV2BQ7L1I2 683 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 ARMCX2Q7L311 632 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 SMAP1Q8IYB5 467 aaPredicted RBP26.54■■□□□ 1.84
SIX4-203ENST00000556952 LRRC27Q9C0I9 530 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 JPH1Q9HDC5 661 aaPredicted RBP26.54■■□□□ 1.84
SIX4-203ENST00000556952 GOLGA6L3A6NEY3 463 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 HMGCRP04035 888 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 SARSP49591 514 aaKnown RBP26.54■■□□□ 1.84
SIX4-203ENST00000556952 MTFR1Q15390 333 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 MSL3Q8N5Y2 521 aaKnown RBP26.54■■□□□ 1.84
SIX4-203ENST00000556952 TRIML1Q8N9V2 468 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 MAML3Q96JK9 1138 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 ANO10Q9NW15 660 aa26.54■■□□□ 1.84
SIX4-203ENST00000556952 FSD2A1L4K1 749 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 POTEFA5A3E0 1075 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 CAVIN2O95810 425 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 CYP4A11Q02928 519 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 POTEGQ6S5H5 508 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 DYDC2Q96IM9 177 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 GSDMAQ96QA5 445 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 SLC9A2Q9UBY0 812 aa26.53■■□□□ 1.84
SIX4-203ENST00000556952 KIAA0100Q14667 2235 aaKnown RBP26.52■■□□□ 1.84
SIX4-203ENST00000556952 SLITRK3O94933 977 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 IGHA2P01877 340 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 P4HBP07237 508 aaKnown RBP26.52■■□□□ 1.84
SIX4-203ENST00000556952 NEDD9Q14511 834 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 KCNK18Q7Z418 384 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 STAMQ92783 540 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 VTA1Q9NP79 307 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 RGL1Q9NZL6 768 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 DNM3Q9UQ16 869 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 SAMM50Q9Y512 469 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 SYNGAP1Q96PV0 1343 aa26.52■■□□□ 1.84
SIX4-203ENST00000556952 CCDC85CA6NKD9 419 aa26.51■■□□□ 1.83
SIX4-203ENST00000556952 CCNE2O96020 404 aa26.51■■□□□ 1.83
SIX4-203ENST00000556952 NLRP12P59046 1061 aa26.51■■□□□ 1.83
SIX4-203ENST00000556952 CUL4BQ13620 913 aa26.51■■□□□ 1.83
SIX4-203ENST00000556952 TRMT44Q8IYL2 757 aaKnown RBP26.51■■□□□ 1.83
SIX4-203ENST00000556952 C7orf25Q9BPX7 421 aa26.51■■□□□ 1.83
SIX4-203ENST00000556952 UBA1P22314 1058 aaKnown RBP26.5■■□□□ 1.83
SIX4-203ENST00000556952 CYP2C19P33261 490 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 SP2Q02086 613 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 MCM6Q14566 821 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 OLFML2BQ68BL8 750 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 EEPD1Q7L9B9 569 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 LXNQ9BS40 222 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 TRIM9Q9C026 710 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 E9PMD0 336 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 ANO6Q4KMQ2 910 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 CNNM4Q6P4Q7 775 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 TPH2Q8IWU9 490 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 FBXO16Q8IX29 292 aaPredicted RBP26.5■■□□□ 1.83
SIX4-203ENST00000556952 BLZF1Q9H2G9 400 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 RMND1Q9NWS8 449 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 MAN1B1Q9UKM7 699 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 PCDHA10Q9Y5I2 948 aa26.5■■□□□ 1.83
SIX4-203ENST00000556952 PLA2G4BP0C869 781 aa26.49■■□□□ 1.83
SIX4-203ENST00000556952 PRKAR2AP13861 404 aaKnown RBP26.49■■□□□ 1.83
SIX4-203ENST00000556952 CACNB2Q08289 660 aaPredicted RBP26.49■■□□□ 1.83
SIX4-203ENST00000556952 CTTNQ14247 550 aaKnown RBP26.49■■□□□ 1.83
SIX4-203ENST00000556952 MAP3K21Q5TCX8 1036 aa26.49■■□□□ 1.83
SIX4-203ENST00000556952 SCFD2Q8WU76 684 aa26.49■■□□□ 1.83
SIX4-203ENST00000556952 NACC1Q96RE7 527 aa26.49■■□□□ 1.83
SIX4-203ENST00000556952 UNC93B1Q9H1C4 597 aa26.49■■□□□ 1.83
SIX4-203ENST00000556952 ZSWIM4Q9H7M6 989 aa26.49■■□□□ 1.83
SIX4-203ENST00000556952 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.49■■□□□ 1.83
SIX4-203ENST00000556952 BIN1O00499 593 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 EYA4O95677 639 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 RPN1P04843 607 aaKnown RBP26.48■■□□□ 1.83
SIX4-203ENST00000556952 CCL5P13501 91 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 CASP1P29466 404 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 QARSP47897 775 aaKnown RBP26.48■■□□□ 1.83
SIX4-203ENST00000556952 TTLL4Q14679 1199 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 BANK1Q8NDB2 785 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 TINF2Q9BSI4 451 aa26.48■■□□□ 1.83
SIX4-203ENST00000556952 DDX41Q9UJV9 622 aaKnown RBP26.48■■□□□ 1.83
SIX4-203ENST00000556952 FRMPD3Q5JV73 1810 aa26.47■■□□□ 1.83
SIX4-203ENST00000556952 LYPLA2O95372 231 aa26.47■■□□□ 1.83
SIX4-203ENST00000556952 SLC12A3P55017 1021 aa26.47■■□□□ 1.83
SIX4-203ENST00000556952 MORC3Q14149 939 aa26.47■■□□□ 1.83
SIX4-203ENST00000556952 DHX8Q14562 1220 aaKnown RBP26.47■■□□□ 1.83
SIX4-203ENST00000556952 METTL7BQ6UX53 244 aa26.47■■□□□ 1.83
SIX4-203ENST00000556952 CYFIP1Q7L576 1253 aa26.47■■□□□ 1.83
SIX4-203ENST00000556952 SYT2Q8N9I0 419 aaPredicted RBP26.47■■□□□ 1.83
SIX4-203ENST00000556952 NAT10Q9H0A0 1025 aaKnown RBP26.47■■□□□ 1.83
SIX4-203ENST00000556952 DKC1O60832 514 aaKnown RBP eCLIP26.46■■□□□ 1.83
SIX4-203ENST00000556952 FARP2O94887 1054 aaPredicted RBP26.46■■□□□ 1.83
SIX4-203ENST00000556952 PSAPP07602 524 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 ACTR2P61160 394 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 PSMC5P62195 406 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 KCNB1Q14721 858 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 MFSD14CQ5VZR4 134 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 MIS18BP1Q6P0N0 1132 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 CCDC62Q6P9F0 684 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 CCDC47Q96A33 483 aaKnown RBP26.46■■□□□ 1.83
SIX4-203ENST00000556952 DNAJC25Q9H1X3 360 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 RBM47A0AV96 593 aaKnown RBP26.46■■□□□ 1.83
SIX4-203ENST00000556952 MYMKA6NI61 221 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 PSMC6P62333 389 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 DPCR1Q3MIW9 517 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms