RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 ZNF365Q70YC5 407 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
IFT43-212ENST00000556742 HERVK_113Q902F9 699 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 VWCEQ96DN2 955 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 SCLYQ96I15 445 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 PCYT2Q99447 389 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 RIT2Q99578 217 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 NAP1L4Q99733 375 aaKnown RBP12.17□□□□□ -0.46
IFT43-212ENST00000556742 MTIF3Q9H2K0 278 aaKnown RBP12.17□□□□□ -0.46
IFT43-212ENST00000556742 BRMS1Q9HCU9 246 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 GJB4Q9NTQ9 266 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
IFT43-212ENST00000556742 TCEAL9Q9UHQ7 104 aa12.17□□□□□ -0.46
IFT43-212ENST00000556742 MSH4O15457 936 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 TREHO43280 583 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 JAK2O60674 1132 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 CCNE2O96020 404 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 MMP1P03956 469 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 RPLP2P05387 115 aaKnown RBP12.16□□□□□ -0.46
IFT43-212ENST00000556742 ACRP10323 421 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 GCFC2P16383 781 aaKnown RBP12.16□□□□□ -0.46
IFT43-212ENST00000556742 KRT2P35908 639 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 STAT5BP51692 787 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 HMGN5P82970 282 aaKnown RBP12.16□□□□□ -0.46
IFT43-212ENST00000556742 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
IFT43-212ENST00000556742 TRIM29Q14134 588 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 FAM160B1Q5W0V3 765 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 LRRC8DQ7L1W4 858 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 RPAINQ86UA6 219 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 CCDC83Q8IWF9 413 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 LMBR1Q8WVP7 490 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 SLC5A5Q92911 643 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 LRCH3Q96II8 777 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 SETD4Q9NVD3 440 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 ARID2Q68CP9 1835 aa12.16□□□□□ -0.46
IFT43-212ENST00000556742 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
IFT43-212ENST00000556742 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
IFT43-212ENST00000556742 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
IFT43-212ENST00000556742 RRN3P2A6NIE6 340 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 TDP2O95551 362 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 CXCL10P02778 98 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 ACTN1P12814 892 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 MCM2P49736 904 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 PPFIA1Q13136 1202 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 INF2Q27J81 1249 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
IFT43-212ENST00000556742 MIS18BP1Q6P0N0 1132 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
IFT43-212ENST00000556742 TNFRSF25Q93038 417 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 WNT8BQ93098 351 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 PCDHA10Q9Y5I2 948 aa12.15□□□□□ -0.46
IFT43-212ENST00000556742 WDR64B1ANS9 1081 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
IFT43-212ENST00000556742 GAS7O60861 476 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 DTNBO60941 627 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 PSMD10O75832 226 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 BAIAP3O94812 1187 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 PSAPP07602 524 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 MARK3P27448 753 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 SFNP31947 248 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 PLCB4Q15147 1175 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 GRIK4Q16099 956 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 ZNF618Q5T7W0 954 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 LRCH2Q5VUJ6 765 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 KRT40Q6A162 431 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 DEFB128Q7Z7B8 93 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 RDM1Q8NG50 284 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 ETNPPLQ8TBG4 499 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 TEKT3Q9BXF9 490 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 ZNF302Q9NR11 478 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 DDX25Q9UHL0 483 aaKnown RBP12.14□□□□□ -0.47
IFT43-212ENST00000556742 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 MAFBQ9Y5Q3 323 aaPredicted RBP12.14□□□□□ -0.47
IFT43-212ENST00000556742 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 COL1A2P08123 1366 aa12.14□□□□□ -0.47
IFT43-212ENST00000556742 IGSF9BQ9UPX0 1349 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 BACH1O14867 736 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 TBX3O15119 743 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 HBP1O60381 514 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 INSRRP14616 1297 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 THPOP40225 353 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 JAK3P52333 1124 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 NR5A1Q13285 461 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 GPNMBQ14956 572 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 MARCH8Q5T0T0 291 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 SWSAP1Q6NVH7 229 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 PDXDC2PQ6P474 469 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms