RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PPM1KQ8N3J5 372 aa6.65□□□□□ -1.34
SCFD1-221ENST00000556534 TTLL6Q8N841 843 aa6.65□□□□□ -1.34
SCFD1-221ENST00000556534 ZSCAN18Q8TBC5 510 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-221ENST00000556534 ZNF526Q8TF50 670 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-221ENST00000556534 WNK4Q96J92 1243 aa6.65□□□□□ -1.34
SCFD1-221ENST00000556534 KCNH7Q9NS40 1196 aa6.65□□□□□ -1.34
SCFD1-221ENST00000556534 B4GALT6Q9UBX8 382 aa6.65□□□□□ -1.34
SCFD1-221ENST00000556534 PRAMEF25A6NGN4 478 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 AOAHP28039 575 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 SEPT7Q16181 437 aaKnown RBP6.64□□□□□ -1.35
SCFD1-221ENST00000556534 ARHGAP44Q17R89 818 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 VMACQ2NL98 169 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 TAF7LQ5H9L4 462 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 PRR31Q5SQ13 230 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 EP400NLQ6ZTU2 488 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 THNSL2Q86YJ6 484 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 ADGRG2Q8IZP9 1017 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 LINC01356Q8N9X3 169 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 CABP5Q9NP86 173 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 DLL4Q9NR61 685 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 BTBD7Q9P203 1132 aa6.64□□□□□ -1.35
SCFD1-221ENST00000556534 A0A1B0GTL3 188 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 PTPDC1A2A3K4 754 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 RASSF10A6NK89 507 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 DVL2O14641 736 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 PDE8AO60658 829 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 ZSCAN22P10073 491 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-221ENST00000556534 SDHAP31040 664 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 NEK4P51957 841 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 HERVK_113P62684 666 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 DSG1Q02413 1049 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 PCBP1Q15365 356 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-221ENST00000556534 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
SCFD1-221ENST00000556534 SKOR2Q2VWA4 1001 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-221ENST00000556534 SLKQ9H2G2 1235 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-221ENST00000556534 ZNF891A8MT65 544 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-221ENST00000556534 TRIM13O60858 407 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 HIP1RO75146 1068 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 KRT37O76014 449 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 MMEP08473 750 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 MYCLP1P12525 358 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-221ENST00000556534 ZNF28P17035 718 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 RPL13P26373 211 aaKnown RBP6.62□□□□□ -1.35
SCFD1-221ENST00000556534 MC4RP32245 332 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 PFKPQ01813 784 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 CATSPEREQ5SY80 951 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 PHF19Q5T6S3 580 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 RNF180Q86T96 592 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 KIF18BQ86Y91 864 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 CLIC6Q96NY7 704 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 WRNIP1Q96S55 665 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 SLC39A2Q9NP94 309 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 NTMQ9P121 344 aa6.62□□□□□ -1.35
SCFD1-221ENST00000556534 MPIG6BO95866 241 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 F2P00734 622 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 ENO2P09104 434 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-221ENST00000556534 COL6A1P12109 1028 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 ATP2A2P16615 1042 aaKnown RBP6.61□□□□□ -1.35
SCFD1-221ENST00000556534 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 CARFQ8N187 725 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 IGDCC4Q8TDY8 1250 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 ASB15Q8WXK1 588 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 ZCCHC14Q8WYQ9 949 aaKnown RBP6.61□□□□□ -1.35
SCFD1-221ENST00000556534 ZFP69BQ9UJL9 534 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
SCFD1-221ENST00000556534 CADPSQ9ULU8 1353 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 FOXP2O15409 715 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 PTGS1P23219 599 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 STAT3P40763 770 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 MASP1P48740 699 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 KIF11P52732 1056 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-221ENST00000556534 SIAH1Q8IUQ4 282 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 AHI1Q8N157 1196 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 NXPE1Q8N323 547 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 KCND1Q9NSA2 647 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 ARHGAP28Q9P2N2 729 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 CROTQ9UKG9 612 aa6.6□□□□□ -1.35
SCFD1-221ENST00000556534 H7C1D1 291 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 IL18BPO95998 194 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 GLRBP48167 497 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 SARSP49591 514 aaKnown RBP6.59□□□□□ -1.35
SCFD1-221ENST00000556534 SLURP1P55000 103 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 MLLT6P55198 1093 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-221ENST00000556534 TMEM132BQ14DG7 1078 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 KIAA1958Q8N8K9 716 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 GBP4Q96PP9 640 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 SPATA25Q9BR10 227 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 OXSMQ9NWU1 459 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 H2AFY2Q9P0M6 372 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-221ENST00000556534 ARHGAP20Q9P2F6 1191 aa6.59□□□□□ -1.35
SCFD1-221ENST00000556534 ADAMTS20P59510 1910 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 CLSTN1O94985 981 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 VIL1P09327 827 aaKnown RBP6.58□□□□□ -1.36
SCFD1-221ENST00000556534 FNTBP49356 437 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 RTN4RL1Q86UN2 441 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-221ENST00000556534 SP8Q8IXZ3 490 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 SMC1BQ8NDV3 1235 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms