RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
SLIRP-205ENST00000556310 PFKMP08237 780 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 RFC2P35250 354 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 USP11P51784 963 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 ACTR2P61160 394 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 ST3GAL1Q11201 340 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 HIC1Q14526 733 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 E2F4Q16254 413 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 TMEM240Q5SV17 173 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 C16orf59Q7L2K0 433 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 LENG9Q96B70 501 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 SCLYQ96I15 445 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
SLIRP-205ENST00000556310 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
SLIRP-205ENST00000556310 LGR5O75473 907 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 IQCF3P0C7M6 154 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 ACRP10323 421 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 GNAT1P11488 350 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 FDPSP14324 419 aaKnown RBP13.09□□□□□ -0.31
SLIRP-205ENST00000556310 ZNF200P98182 395 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-205ENST00000556310 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLIRP-205ENST00000556310 RABEP1Q15276 862 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 PRR16Q569H4 304 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 SERINC5Q86VE9 423 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
SLIRP-205ENST00000556310 TBCKQ8TEA7 893 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 GLG1Q92896 1179 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 ATP6V0A1Q93050 837 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
SLIRP-205ENST00000556310 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
SLIRP-205ENST00000556310 GBF1Q92538 1859 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
SLIRP-205ENST00000556310 DHX15O43143 795 aaKnown RBP13.08□□□□□ -0.32
SLIRP-205ENST00000556310 EDIL3O43854 480 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 JAK2O60674 1132 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 DTNBO60941 627 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 ATG7O95352 703 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
SLIRP-205ENST00000556310 CCNE2O96020 404 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 CKBP12277 381 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 SELPP16109 830 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
SLIRP-205ENST00000556310 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 LMBR1Q8WVP7 490 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 WNT8BQ93098 351 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-205ENST00000556310 PCYT2Q99447 389 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 RNPEPQ9H4A4 650 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 SH2B1Q9NRF2 756 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-205ENST00000556310 GJB4Q9NTQ9 266 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 TCEAL9Q9UHQ7 104 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 SIP14410 1827 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 NRCAMQ92823 1304 aa13.08□□□□□ -0.32
SLIRP-205ENST00000556310 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 C2orf72A6NCS6 295 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 TREHO43280 583 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 FGBP02675 491 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 CYP3A7P24462 503 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 MARK3P27448 753 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 ADAM17P78536 824 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 SMAD3P84022 425 aaKnown RBP13.07□□□□□ -0.32
SLIRP-205ENST00000556310 KRT76Q01546 638 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 PPFIA1Q13136 1202 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-205ENST00000556310 ABHD15Q6UXT9 468 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 PLPPR4Q7Z2D5 763 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-205ENST00000556310 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 LLPHQ9BRT6 129 aaKnown RBP13.07□□□□□ -0.32
SLIRP-205ENST00000556310 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 SETD4Q9NVD3 440 aa13.07□□□□□ -0.32
SLIRP-205ENST00000556310 IGKV6D-21A0A0A0MT36 114 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 MSH4O15457 936 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 ST18O60284 1047 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 CAND2O75155 1236 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 TDP2O95551 362 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 KRT2P35908 639 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 SLC26A2P50443 739 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 STAT5BP51692 787 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 INF2Q27J81 1249 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 Q4G0T1 1027 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms