RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 RPGRIP1Q96KN7 1286 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 GPR20Q99678 358 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 CNNM2Q9H8M5 875 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 BARX2Q9UMQ3 279 aaPredicted RBP18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 RWDD3Q9Y3V2 267 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 PCDHA1Q9Y5I3 950 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 MRPL42Q9Y6G3 142 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
SDR39U1-217ENST00000556249 LOC730098B7Z3J9 87 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 ITGB1P05556 798 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 GNAT1P11488 350 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 ADAM17P78536 824 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 GHRHRQ02643 423 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 LPIN1Q14693 890 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 RALYLQ86SE5 291 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 NCOA7Q8NI08 942 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 RBM19Q9Y4C8 960 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-217ENST00000556249 DOCK5Q9H7D0 1870 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 DGKIO75912 1065 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 GLP2RO95838 553 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 NRIP1P48552 1158 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 MRPS9P82933 396 aaKnown RBP18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 RBM10P98175 930 aaKnown RBP18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 SEMA3FQ13275 785 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 PAN2Q504Q3 1202 aaKnown RBP18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 BLOC1S2Q6QNY1 142 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 SMRP1Q8NCR6 262 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 SPPL3Q8TCT6 385 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 ATOH1Q92858 354 aaPredicted RBP18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 KRT23Q9C075 422 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 EHMT1Q9H9B1 1298 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 ZSWIM6Q9HCJ5 1215 aa18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 USP15Q9Y4E8 981 aaPredicted RBP18.26■□□□□ 0.51
SDR39U1-217ENST00000556249 CFAP54Q96N23 3096 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 KMT2EQ8IZD2 1858 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 KLRF2D3W0D1 207 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 PPFIA3O75145 1194 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 MGAT3Q09327 533 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 METTL7BQ6UX53 244 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 EFHBQ8N7U6 833 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 KLHL23Q8NBE8 558 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 LINC01599Q8WXQ3 324 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 PRRX2Q99811 253 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 PLVAPQ9BX97 442 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
SDR39U1-217ENST00000556249 H0Y858 1186 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 GCOM1H8Y6P7 765 aaPredicted RBP18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 PER2O15055 1255 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 ZBTB5O15062 677 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 POLR2MP0CAP2 368 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 GATMP50440 423 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 SIGLEC14Q08ET2 396 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 COASYQ13057 564 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 PKN1Q16512 942 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 SLC35G1Q2M3R5 365 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 POF1BQ8WVV4 589 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 DNAJB3Q8WWF6 145 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 ZBTB10Q96DT7 871 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 MTMR8Q96EF0 704 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 TLR9Q9NR96 1032 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 MAP3K20Q9NYL2 800 aaKnown RBP18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 ZDBF2Q9HCK1 2354 aa18.24■□□□□ 0.51
SDR39U1-217ENST00000556249 SPATA31C2B4DYI2 1134 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 AVPR2P30518 371 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 ANP32AP39687 249 aaKnown RBP18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 NEK4P51957 841 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 NEDD9Q14511 834 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 CBX2Q14781 532 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 DHX32Q7L7V1 743 aaKnown RBP18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 RTN4RL1Q86UN2 441 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 PIGSQ96S52 555 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 MAD2L2Q9UI95 211 aa18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 ZNF215Q9UL58 517 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-217ENST00000556249 TTC3P53804 2025 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 PDGFBP01127 241 aaPredicted RBP18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 MARK3P27448 753 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 CD52P31358 61 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 MCM5P33992 734 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 GNPTABQ3T906 1256 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 FBXO47Q5MNV8 452 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 MB21D2Q8IYB1 491 aaPredicted RBP18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 P2RX5Q93086 422 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 PPP2R3CQ969Q6 453 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 PHF7Q9BWX1 381 aaPredicted RBP18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 CDY2AQ9Y6F7 541 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 NRCAMQ92823 1304 aa18.22■□□□□ 0.51
SDR39U1-217ENST00000556249 KIAA1671Q9BY89 1806 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 SP100P23497 879 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms