RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FIBCD1Q8N539 461 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CYP2W1Q8TAV3 490 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 SEPT1Q8WYJ6 367 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 NSUN3Q9H649 340 aaKnown RBP16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CDY2AQ9Y6F7 541 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 FNDC1Q4ZHG4 1894 aaPredicted RBP16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 EVPLQ92817 2033 aa16.5■□□□□ 0.23
CHMP4BP1-201ENST00000556017 WDR81Q562E7 1941 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 SLC27A2O14975 620 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 DGKIO75912 1065 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CTNNB1P35222 781 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 ZP2Q05996 745 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 FUT2Q10981 343 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 GIMAP8Q8ND71 665 aaPredicted RBP16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CUL5Q93034 780 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TMEM87BQ96K49 555 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 LRRC2Q9BYS8 371 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 JADE2Q9NQC1 790 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 ERAP1Q9NZ08 941 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PCDHA6Q9UN73 950 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PCDHA8Q9Y5H6 950 aa16.49■□□□□ 0.23
CHMP4BP1-201ENST00000556017 RB1P06400 928 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 INSRRP14616 1297 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 DNAJB1P25685 340 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CD52P31358 61 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 MCM5P33992 734 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 MTMR1Q13613 665 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CDHR1Q96JP9 859 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TECTAO75443 2155 aa16.48■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PRR33A8MZF0 331 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TBX10O75333 385 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 GNAQP50148 359 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 MRPS6P82932 125 aaKnown RBP16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 ITGB3BPQ13352 177 aaPredicted RBP16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PUS10Q3MIT2 529 aaKnown RBP16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 WWC2Q6AWC2 1192 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TSHZ1Q6ZSZ6 1077 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 SGMS1Q86VZ5 419 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 KCNH7Q9NS40 1196 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CLDND1Q9NY35 253 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
CHMP4BP1-201ENST00000556017 MAFGO15525 162 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 LINC01565O15544 149 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 ARP10275 920 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 IRX6P78412 446 aaPredicted RBP16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PLCB4Q15147 1175 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TMTC2Q8N394 836 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 TMX1Q9H3N1 280 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 ALG13Q9NP73 1137 aaKnown RBP16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 PLAGL2Q9UPG8 496 aa16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
CHMP4BP1-201ENST00000556017 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ATG7O95352 703 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MMP1P03956 469 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SSTR3P32745 418 aaPredicted RBP16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IRS1P35568 1242 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IGBP1P78318 339 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ADHFE1Q8IWW8 467 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 GLG1Q92896 1179 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MXRA8Q9BRK3 442 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 C11orf84Q9BUA3 381 aaPredicted RBP16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 JPH1Q9HDC5 661 aaPredicted RBP16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PRKAG3Q9UGI9 489 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PADI3Q9ULW8 664 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 NFASCO94856 1347 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IGSF9BQ9UPX0 1349 aa16.45■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IGKV6D-21A0A0A0MT36 114 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 RRN3P2A6NIE6 340 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MBTPS2O43462 519 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CCNE2O96020 404 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ITGB1P05556 798 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CALM1P0DP23 149 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CALM2P0DP24 149 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CALM3P0DP25 149 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CLK2P49760 499 aaKnown RBP16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 GATMP50440 423 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms