RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
SRP54-206ENST00000555317 NR5A1Q13285 461 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 SHHQ15465 462 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 C9orf50Q5SZB4 431 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 PDXDC2PQ6P474 469 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 PLPPR4Q7Z2D5 763 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 DEFB128Q7Z7B8 93 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 LENG9Q96B70 501 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 RIT2Q99578 217 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 FTOQ9C0B1 505 aaKnown RBP eCLIP13.68□□□□□ -0.22
SRP54-206ENST00000555317 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 ZNF302Q9NR11 478 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 DHX15O43143 795 aaKnown RBP13.67□□□□□ -0.22
SRP54-206ENST00000555317 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
SRP54-206ENST00000555317 FGBP02675 491 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 ACTN1P12814 892 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
SRP54-206ENST00000555317 SFNP31947 248 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 THPOP40225 353 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 FXR1P51114 621 aaKnown RBP eCLIP13.67□□□□□ -0.22
SRP54-206ENST00000555317 JAK3P52333 1124 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 EPHB4P54760 987 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 IGBP1P78318 339 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 GUCY1B3Q02153 619 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 GRIK4Q16099 956 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 ABHD15Q6UXT9 468 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 RSPH3Q86UC2 560 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 SERINC5Q86VE9 423 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
SRP54-206ENST00000555317 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
SRP54-206ENST00000555317 POTEB3A0JP26 581 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 ZBBXA8MT70 800 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 TREHO43280 583 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 CAND2O75155 1236 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 ATG7O95352 703 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
SRP54-206ENST00000555317 IQCF3P0C7M6 154 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 CKBP12277 381 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 HOXC8P31273 242 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 SWSAP1Q6NVH7 229 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 TAF2Q6P1X5 1199 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 POTEBQ6S5H4 581 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
SRP54-206ENST00000555317 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
SRP54-206ENST00000555317 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
SRP54-206ENST00000555317 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 SLC37A4O43826 429 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 RPLP2P05387 115 aaKnown RBP13.65□□□□□ -0.22
SRP54-206ENST00000555317 INSRRP14616 1297 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 RBL2Q08999 1139 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 OTOP2Q7RTS6 562 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 MIER3Q7Z3K6 550 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
SRP54-206ENST00000555317 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 ATP8B4Q8TF62 1192 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 FAM167AQ96KS9 214 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 FAM20AQ96MK3 541 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 PCYT2Q99447 389 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 GABBR1Q9UBS5 961 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 SMC3Q9UQE7 1217 aa13.65□□□□□ -0.22
SRP54-206ENST00000555317 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 RSPH10B2B2RC85 870 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 H3BQV1 296 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 HBP1O60381 514 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 PSMD10O75832 226 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 CD2BP2O95400 341 aaKnown RBP13.64□□□□□ -0.23
SRP54-206ENST00000555317 CTSHP09668 335 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 RSPH10BP0C881 870 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 HIC1Q14526 733 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 ZNF618Q5T7W0 954 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 TRMT1LQ7Z2T5 733 aaKnown RBP13.64□□□□□ -0.23
SRP54-206ENST00000555317 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 RDM1Q8NG50 284 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 HERVK_113Q902F9 699 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 TNFRSF25Q93038 417 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 GJA10Q969M2 543 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
SRP54-206ENST00000555317 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
SRP54-206ENST00000555317 NOL7Q9UMY1 257 aaKnown RBP13.64□□□□□ -0.23
SRP54-206ENST00000555317 TET1Q8NFU7 2136 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 COL1A2P08123 1366 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 M0QZ92 97 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms