RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 STAT5BP51692 787 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 PSMC5P62195 406 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-215ENST00000554997 BEX3Q00994 111 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 LRRC41Q15345 812 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 KCNA10Q16322 511 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 CATSPER3Q86XQ3 398 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 TMEM87AQ8NBN3 555 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 AFAP1L1Q8TED9 768 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 PCYT2Q99447 389 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 C16orf70Q9BSU1 422 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 MMTAG2Q9BU76 263 aaKnown RBP11.45□□□□□ -0.58
SYNE2-215ENST00000554997 CCSER1Q9C0I3 900 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 SMARCAD1Q9H4L7 1026 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 AZI2Q9H6S1 392 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 TUFT1Q9NNX1 390 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 ZNF302Q9NR11 478 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 LRRC37A2A6NM11 1700 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 MYADML2A6NDP7 307 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 GOLGA6L4A6NEF3 574 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 BACH1O14867 736 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 DKC1O60832 514 aaKnown RBP eCLIP11.44□□□□□ -0.58
SYNE2-215ENST00000554997 PRPF40AO75400 957 aaKnown RBP11.44□□□□□ -0.58
SYNE2-215ENST00000554997 LYPLA2O95372 231 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 GJA8P48165 433 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 SPECC1Q5M775 1068 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 HYIQ5T013 277 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 FAM160B1Q5W0V3 765 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 HAUS3Q68CZ6 603 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 SHC4Q6S5L8 630 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 USP49Q70CQ1 688 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 TPH2Q8IWU9 490 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 NEK9Q8TD19 979 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
SYNE2-215ENST00000554997 GLG1Q92896 1179 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 ATP6V0A1Q93050 837 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 DYDC2Q96IM9 177 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 TMEM106CQ9BVX2 250 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 ZSWIM4Q9H7M6 989 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 RGL1Q9NZL6 768 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 GABBR1Q9UBS5 961 aa11.44□□□□□ -0.58
SYNE2-215ENST00000554997 HTTP42858 3142 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 H3BRB1 525 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 MED24O75448 989 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CABYRO75952 493 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 LGALS2P05162 132 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 ASGR1P07306 291 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 MYL3P08590 195 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 ATP4AP20648 1035 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CCT6AP40227 531 aaKnown RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 ACLYP53396 1101 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 PURAQ00577 322 aaKnown RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 UTP14CQ5TAP6 766 aaKnown RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 PDXDC2PQ6P474 469 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CABP7Q86V35 215 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CCDC60Q8IWA6 550 aaPredicted RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 SNX29Q8TEQ0 813 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 KAT2BQ92831 832 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CALML4Q96GE6 196 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 NACC1Q96RE7 527 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 MTG1Q9BT17 334 aaPredicted RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 NT5C3AQ9H0P0 336 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
SYNE2-215ENST00000554997 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 FAM13BQ9NYF5 915 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 ERAP1Q9NZ08 941 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 KIAA1024Q9UPX6 916 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 KIAA1217Q5T5P2 1943 aa11.43□□□□□ -0.58
SYNE2-215ENST00000554997 GOLGA6L22H0YM25 854 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 HAS3O00219 553 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 DNM1LO00429 736 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 ZNF862O60290 1169 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 STBD1O95210 358 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-215ENST00000554997 TXLNAP40222 546 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 ECM1Q16610 540 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 ANKLE1Q8NAG6 615 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 BANK1Q8NDB2 785 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 PNMA5Q96PV4 448 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 LXNQ9BS40 222 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 NIFKQ9BYG3 293 aaKnown RBP11.42□□□□□ -0.58
SYNE2-215ENST00000554997 RNPEPQ9H4A4 650 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 WRAP73Q9P2S5 460 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-215ENST00000554997 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-215ENST00000554997 KCNH3Q9ULD8 1083 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
SYNE2-215ENST00000554997 MCM3APO60318 1980 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms