RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PLIN2Q99541 437 aa17.09■□□□□ 0.33
SYNE3-203ENST00000554873 PIDD1Q9HB75 910 aa17.09■□□□□ 0.33
SYNE3-203ENST00000554873 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.33
SYNE3-203ENST00000554873 NCALDP61601 193 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 UBE4AQ14139 1066 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 CNBD1Q8NA66 436 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 ISCUQ9H1K1 167 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 THAP9Q9H5L6 903 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.33
SYNE3-203ENST00000554873 DLEC1Q9Y238 1755 aa17.08■□□□□ 0.33
SYNE3-203ENST00000554873 SRGNP10124 158 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 CALML3P27482 149 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.32
SYNE3-203ENST00000554873 TRADDQ15628 312 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 DTHD1Q6ZMT9 781 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 TRIM47Q96LD4 638 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 SAMD15Q9P1V8 674 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 PCDHGA4Q9Y5G9 962 aa17.08■□□□□ 0.32
SYNE3-203ENST00000554873 GRID2IPA4D2P6 1211 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 ZNF131P52739 623 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 ATP11AP98196 1134 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 DYNC1I2Q13409 638 aaKnown RBP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 EEF2KMTQ96G04 330 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 MMTAG2Q9BU76 263 aaKnown RBP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 LRRC42Q9Y546 428 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 A0A1B0GVG6 124 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 EIF4E1BA6NMX2 242 aaKnown RBP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 RARAP10276 462 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 HSPA2P54652 639 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 MTMR3Q13615 1198 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 TRIM68Q6AZZ1 485 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 GIMAP8Q8ND71 665 aaPredicted RBP17.07■□□□□ 0.32
SYNE3-203ENST00000554873 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
SYNE3-203ENST00000554873 FLOT1O75955 427 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 MYBP10242 640 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 MYBL1P10243 752 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 KLK7P49862 253 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 MECOMQ03112 1051 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 CUL1Q13616 776 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 DUSP9Q99956 384 aaKnown RBP17.06■□□□□ 0.32
SYNE3-203ENST00000554873 ADAM22Q9P0K1 906 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 A0A0G2JS52 829 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 TSPY2A6NKD2 308 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 PSMA7O14818 248 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 CMPK2Q5EBM0 449 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 TUBGCP2Q9BSJ2 902 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 ECT2Q9H8V3 914 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
SYNE3-203ENST00000554873 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 M0R2N6 131 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 UBA7P41226 1012 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 ADAM9Q13443 819 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 KLHDC7AQ5VTJ3 777 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 STAG2Q8N3U4 1231 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
SYNE3-203ENST00000554873 MAP3K13O43283 966 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 RAD51CO43502 376 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 WFS1O76024 890 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 MSH2P43246 934 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 TUBP50607 506 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 TNNC1P63316 161 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 MDM1Q8TC05 714 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 BLOC1S6Q9UL45 172 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 A8MUI8 341 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 UBOX5O94941 541 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 KRT16P08779 473 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 ECHS1P30084 290 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 APBB1IPQ7Z5R6 666 aaPredicted RBP17.05■□□□□ 0.32
SYNE3-203ENST00000554873 CSGALNACT2Q8N6G5 542 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 KLHL29Q96CT2 875 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
SYNE3-203ENST00000554873 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 ABCF3Q9NUQ8 709 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
SYNE3-203ENST00000554873 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 LCA5LO95447 670 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 SLC4A8Q2Y0W8 1093 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 UBLCP1Q8WVY7 318 aaPredicted RBP17.04■□□□□ 0.32
SYNE3-203ENST00000554873 TLCD1Q96CP7 247 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 NOX5Q96PH1 765 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 SYT15Q9BQS2 421 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms