RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DHX40Q8IX18 779 aaKnown RBP15.04■□□□□ -0
VTI1B-204ENST00000554659 MCUQ8NE86 351 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 TBK1Q9UHD2 729 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 SRGAP2BP0DMP2 458 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 CASP2P42575 452 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 DHX36Q9H2U1 1008 aaKnown RBP15.04■□□□□ -0
VTI1B-204ENST00000554659 MORC2Q9Y6X9 1032 aaPredicted RBP15.04■□□□□ -0
VTI1B-204ENST00000554659 TLR3O15455 904 aaKnown RBP15.04■□□□□ -0
VTI1B-204ENST00000554659 TBC1D10CQ8IV04 446 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 SLC5A4Q9NY91 659 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 CYP2D7A0A087X1C5 515 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 BIRC2Q13490 618 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 TMTC4Q5T4D3 741 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 TTLL11Q8NHH1 800 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 ANGPTL2Q9UKU9 493 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 WDR17Q8IZU2 1322 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 SYNGAP1Q96PV0 1343 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 SORBS3O60504 671 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 GYS2P54840 703 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 MECOMQ03112 1051 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 SEMA3FQ13275 785 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 PDCLQ13371 301 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 ERFEQ4G0M1 354 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 SYDE2Q5VT97 1194 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 GDAP1Q8TB36 358 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 ADGRG1Q9Y653 693 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 MAPK13O15264 365 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 MAP3K7O43318 606 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 STX1BP61266 288 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 UBXN2AP68543 259 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 BASP1P80723 227 aaKnown RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 ITKQ08881 620 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 PFKFB3Q16875 520 aaPredicted RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 RSBN1LQ6PCB5 846 aaPredicted RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 N4BP2L2Q92802 583 aaPredicted RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 DYNLL2Q96FJ2 89 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 PPEF1O14829 653 aaPredicted RBP15.03■□□□□ -0
VTI1B-204ENST00000554659 TMED1Q13445 227 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 RAPH1Q70E73 1250 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 CENPUQ71F23 418 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 SPICE1Q8N0Z3 855 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 CCDC138Q96M89 665 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 GJB4Q9NTQ9 266 aa15.03■□□□□ -0
VTI1B-204ENST00000554659 PVALEFA0A1B0GWK0 134 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 GOLGA8CPA6NN73 597 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 XPOTO43592 962 aaKnown RBP15.02■□□□□ -0
VTI1B-204ENST00000554659 GGCXP38435 758 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 UBE2SQ16763 222 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 MIS18BP1Q6P0N0 1132 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 CDHR1Q96JP9 859 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 TRIM56Q9BRZ2 755 aaKnown RBP15.02■□□□□ -0
VTI1B-204ENST00000554659 CEP170P1Q96L14 293 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 DRC3Q9H069 523 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 ANLNQ9NQW6 1124 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 NEDD4P46934 1319 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 GOLGA8SH3BPF8 625 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 DCTN3O75935 186 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 MMEP08473 750 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 ACTN1P12814 892 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 DDIT3P35638 169 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 LRRC23Q53EV4 343 aaPredicted RBP15.02■□□□□ -0
VTI1B-204ENST00000554659 NUGGCQ68CJ6 796 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 DARS2Q6PI48 645 aaKnown RBP15.02■□□□□ -0
VTI1B-204ENST00000554659 CNKSR1Q969H4 720 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 ANO3Q9BYT9 981 aa15.02■□□□□ -0
VTI1B-204ENST00000554659 LAMC1P11047 1609 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 IQANK1A0A1B0GTG1 560 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 GRID2IPA4D2P6 1211 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 USP17L3A6NCW0 530 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 USP17L4A6NCW7 530 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 USP27XA6NNY8 438 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 SRGAP2O75044 1071 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 BBOX1O75936 387 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 CA4P22748 312 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 STAT2P52630 851 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 ORC2Q13416 577 aaPredicted RBP15.02□□□□□ -0.01
VTI1B-204ENST00000554659 USP17L1Q7RTZ2 530 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 MRFAP1Q9Y605 127 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 SCINQ9Y6U3 715 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 KPNA2P52292 529 aaKnown RBP15.02□□□□□ -0.01
VTI1B-204ENST00000554659 NBPF9Q3BBW0 867 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 NOP53Q9NZM5 478 aaKnown RBP15.02□□□□□ -0.01
VTI1B-204ENST00000554659 USP21Q9UK80 565 aa15.02□□□□□ -0.01
VTI1B-204ENST00000554659 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 LRRC53A6NM62 1247 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 GNGT2O14610 69 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 IGKV5-2P06315 115 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 TRIP13Q15645 432 aaPredicted RBP15.01□□□□□ -0.01
VTI1B-204ENST00000554659 TSGA10IPQ3SY00 556 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 PIP4K2CQ8TBX8 421 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 EFHD1Q9BUP0 239 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 FGFR1OP2Q9NVK5 253 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms