RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 MSRAQ9UJ68 235 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 LAMA2P24043 3122 aaKnown RBP12.09□□□□□ -0.47
SHMT2-213ENST00000554600 LGR5O75473 907 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 CCNE2O96020 404 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 INSRRP14616 1297 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
SHMT2-213ENST00000554600 CIITAP33076 1130 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 PBX2P40425 430 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 USP11P51784 963 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 RBL2Q08999 1139 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 TRIM29Q14134 588 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 INF2Q27J81 1249 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
SHMT2-213ENST00000554600 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
SHMT2-213ENST00000554600 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 TNPO1Q92973 898 aaKnown RBP12.08□□□□□ -0.48
SHMT2-213ENST00000554600 PCYT2Q99447 389 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 BRMS1Q9HCU9 246 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 ZNF302Q9NR11 478 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 TUBE1Q9UJT0 475 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 LIMCH1Q9UPQ0 1083 aa12.08□□□□□ -0.48
SHMT2-213ENST00000554600 POTEB3A0JP26 581 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 RRN3P2A6NIE6 340 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 MSH4O15457 936 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
SHMT2-213ENST00000554600 CHMP2AO43633 222 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 JAK2O60674 1132 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 GAS7O60861 476 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 NBNO60934 754 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 TDP2O95551 362 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 HOXC8P31273 242 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 RABGGTBP53611 331 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 KRT76Q01546 638 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 PLCB4Q15147 1175 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 RAB30Q15771 203 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 LETM2Q2VYF4 491 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-213ENST00000554600 SWSAP1Q6NVH7 229 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 POTEBQ6S5H4 581 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 PLPPR4Q7Z2D5 763 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 RSPH3Q86UC2 560 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 NLRC5Q86WI3 1866 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 CCDC83Q8IWF9 413 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 NSUN7Q8NE18 718 aaKnown RBP12.07□□□□□ -0.48
SHMT2-213ENST00000554600 TRAPPC12Q8WVT3 735 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 TIFAQ96CG3 184 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 VWCEQ96DN2 955 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 TEKT3Q9BXF9 490 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 PBX4Q9BYU1 374 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 FAM49AQ9H0Q0 323 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-213ENST00000554600 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
SHMT2-213ENST00000554600 SPTBN5Q9NRC6 3674 aaKnown RBP12.07□□□□□ -0.48
SHMT2-213ENST00000554600 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 MARCH6O60337 910 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 BAIAP3O94812 1187 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 ATG7O95352 703 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 PSAPP07602 524 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 FDPSP14324 419 aaKnown RBP12.06□□□□□ -0.48
SHMT2-213ENST00000554600 KRT2P35908 639 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 IKBKEQ14164 716 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 NPY5RQ15761 445 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 LRCH2Q5VUJ6 765 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 TAF2Q6P1X5 1199 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 ABHD15Q6UXT9 468 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 RUFY4Q6ZNE9 571 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 PIK3AP1Q6ZUJ8 805 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 CCDC60Q8IWA6 550 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-213ENST00000554600 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 GJA10Q969M2 543 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 LENG9Q96B70 501 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 SLC9A7Q96T83 725 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 NKX2-4Q9H2Z4 354 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 TTYH1Q9H313 450 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-213ENST00000554600 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
SHMT2-213ENST00000554600 PCDHA10Q9Y5I2 948 aa12.06□□□□□ -0.48
SHMT2-213ENST00000554600 TMEM265A0A087WTH1 108 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 M0R2N6 131 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 CAND2O75155 1236 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 CXCL10P02778 98 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 SLC26A2P50443 739 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 ADAM17P78536 824 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 GPNMBQ14956 572 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 Q4G0T1 1027 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 TRAF7Q6Q0C0 670 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 SMAP1Q8IYB5 467 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-213ENST00000554600 DNAJB3Q8WWF6 145 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 SEPT8Q92599 483 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 SLC5A5Q92911 643 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 ZBTB10Q96DT7 871 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 ZSCAN31Q96LW9 406 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms