RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCFD1-211ENST00000554437 B3GALT1Q9Y5Z6 326 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 H7C1D1 291 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 GAS7O60861 476 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 C4BPAP04003 597 aaKnown RBP7.2□□□□□ -1.26
SCFD1-211ENST00000554437 AFF3P51826 1226 aaKnown RBP7.2□□□□□ -1.26
SCFD1-211ENST00000554437 TMEM132BQ14DG7 1078 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 SKOR2Q2VWA4 1001 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-211ENST00000554437 CD276Q5ZPR3 534 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 PROSER1Q86XN7 944 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 THNSL2Q86YJ6 484 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 KYQ8NBH2 561 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 DACT3Q96B18 629 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-211ENST00000554437 TMEM209Q96SK2 561 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCFD1-211ENST00000554437 PRKAB1Q9Y478 270 aa7.2□□□□□ -1.26
SCFD1-211ENST00000554437 DBX1A6NMT0 343 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 ZNF891A8MT65 544 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-211ENST00000554437 F2P00734 622 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 ENO2P09104 434 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-211ENST00000554437 SCNN1BP51168 640 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 HTRA3P83110 453 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 PFKPQ01813 784 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 DBPQ10586 325 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-211ENST00000554437 SART3Q15020 963 aaKnown RBP7.19□□□□□ -1.26
SCFD1-211ENST00000554437 ZNF174Q15697 407 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 SEPT7Q16181 437 aaKnown RBP7.19□□□□□ -1.26
SCFD1-211ENST00000554437 LIPIQ6XZB0 460 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 TMEM151BQ8IW70 566 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 UBR7Q8N806 425 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 TTLL6Q8N841 843 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 LINC00482Q8N8I6 264 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 DLG3Q92796 817 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 ZSWIM3Q96MP5 696 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 CLIC6Q96NY7 704 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 ARHGAP28Q9P2N2 729 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 WASF3Q9UPY6 502 aa7.19□□□□□ -1.26
SCFD1-211ENST00000554437 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 FOXP2O15409 715 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 SOX5P35711 763 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 STAT3P40763 770 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 KIF11P52732 1056 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 ADAM9Q13443 819 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 ZNF662Q6ZS27 426 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 DDX46Q7L014 1031 aaKnown RBP7.18□□□□□ -1.26
SCFD1-211ENST00000554437 LRRC56Q8IYG6 542 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-211ENST00000554437 OR2W6PQ8NHA6 318 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 CHAC2Q8WUX2 184 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 PCIF1Q9H4Z3 704 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 SLC39A2Q9NP94 309 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 DLL4Q9NR61 685 aa7.18□□□□□ -1.26
SCFD1-211ENST00000554437 SHROOM4Q9ULL8 1493 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 ZNF839A8K0R7 811 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 MMEP08473 750 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 ATP2A2P16615 1042 aaKnown RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 CFPP27918 469 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 HERVK_113P62684 666 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 DSG1Q02413 1049 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 SKIDA1Q1XH10 827 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 VMACQ2NL98 169 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 CT47A1Q5JQC4 288 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 RNF187Q5TA31 235 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 TCERG1LQ5VWI1 586 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 CC2D1AQ6P1N0 951 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 RNF180Q86T96 592 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 SAPCD2Q86UD0 394 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 CILP2Q8IUL8 1156 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 KIAA1958Q8N8K9 716 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 DTX3Q8N9I9 347 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 ZSCAN18Q8TBC5 510 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 ZNF526Q8TF50 670 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 TMX1Q9H3N1 280 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 OXSMQ9NWU1 459 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 THG1LQ9NWX6 298 aaKnown RBP7.17□□□□□ -1.26
SCFD1-211ENST00000554437 CROTQ9UKG9 612 aa7.17□□□□□ -1.26
SCFD1-211ENST00000554437 DVL2O14641 736 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 SLC9A1P19634 815 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 AOAHP28039 575 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 CNGA1P29973 690 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 THBS2P35442 1172 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 GLRBP48167 497 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 CAP1Q01518 475 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 VWA3BQ502W6 1294 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 PHF19Q5T6S3 580 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 TTLL7Q6ZT98 887 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 FILIP1Q7Z7B0 1213 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 HIPK4Q8NE63 616 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 IGDCC4Q8TDY8 1250 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 CHTF18Q8WVB6 975 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 GPR101Q96P66 508 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-211ENST00000554437 GBP4Q96PP9 640 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 SPC25Q9HBM1 224 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 ACSS2Q9NR19 701 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 SPATA6Q9NWH7 488 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-211ENST00000554437 ARHGAP20Q9P2F6 1191 aa7.16□□□□□ -1.26
SCFD1-211ENST00000554437 FFAR3O14843 346 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 DNAJC6O75061 913 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 SDHAP31040 664 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms