RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 DRC1Q96MC2 740 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 IKZF4Q9H2S9 585 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 CEP72Q9P209 647 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
LRP1-207ENST00000554174 POLR3GO15318 223 aaPredicted RBP13.47□□□□□ -0.25
LRP1-207ENST00000554174 CHMP2AO43633 222 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 GNA14O95837 355 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 KNOP1Q1ED39 458 aaKnown RBP13.47□□□□□ -0.25
LRP1-207ENST00000554174 EDRF1Q3B7T1 1238 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 OTOP1Q7RTM1 612 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 TSGA10Q9BZW7 698 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 JADE2Q9NQC1 790 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
LRP1-207ENST00000554174 ANO9A1A5B4 782 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 SLITRK3O94933 977 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 ACTN1P12814 892 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 KCNA3P22001 575 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
LRP1-207ENST00000554174 TTLL6Q8N841 843 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
LRP1-207ENST00000554174 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
LRP1-207ENST00000554174 L1RE1Q9UN81 338 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 TRAF3IP3Q9Y228 551 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.25
LRP1-207ENST00000554174 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.26
LRP1-207ENST00000554174 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 ASTN1O14525 1302 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 CETN3O15182 167 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 PSMD10O75832 226 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 AKAP3O75969 853 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 MAGEA1P43355 309 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 TUBB4BP68371 445 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 RASSF7Q02833 373 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 ARID5AQ03989 594 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 TDRD12Q587J7 1177 aaKnown RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 SFMBT2Q5VUG0 894 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 RINT1Q6NUQ1 792 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 DPY19L2P1Q6NXN4 242 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 TPH2Q8IWU9 490 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 OGFOD1Q8N543 542 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 DYDC2Q96IM9 177 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 WRAP73Q9P2S5 460 aaPredicted RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 H3BQF6 201 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 GCOM1H8Y6P7 765 aaPredicted RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 KIF20AO95235 890 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 EYA4O95677 639 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 OAS2P29728 719 aaKnown RBP13.45□□□□□ -0.26
LRP1-207ENST00000554174 USP14P54578 494 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 GANQ9H2C0 597 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 HDAC9Q9UKV0 1011 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 JRKLQ9Y4A0 524 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 KIF13BQ9NQT8 1826 aa13.45□□□□□ -0.26
LRP1-207ENST00000554174 SSU72P8A0A1W2PR75 194 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 SHTN1A0MZ66 631 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 ARP10275 920 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 SLC9A1P19634 815 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 CASP4P49662 377 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 ENOX2Q16206 610 aaKnown RBP13.44□□□□□ -0.26
LRP1-207ENST00000554174 ZNF771Q7L3S4 317 aaPredicted RBP13.44□□□□□ -0.26
LRP1-207ENST00000554174 CREG2Q8IUH2 290 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 RTKN2Q8IZC4 609 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 TRIM58Q8NG06 486 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 PSMB7Q99436 277 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 PSMD1Q99460 953 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 SNX12Q9UMY4 172 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 CLIC2O15247 247 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 PJA2O43164 708 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 NCK2O43639 380 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 BUB1O43683 1085 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 TACC1O75410 805 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 ZMYND10O75800 440 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 GCNT3O95395 438 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 SERPING1P05155 500 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 DPEP1P16444 411 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 CXCR5P32302 372 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 CAP2P40123 477 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 RAPGEF1Q13905 1077 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 NBPF9Q3BBW0 867 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 SLC9C1Q4G0N8 1177 aa13.44□□□□□ -0.26
LRP1-207ENST00000554174 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms