RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 GDF11O95390 407 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 RRP1BQ14684 758 aaKnown RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CERKLQ49MI3 558 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 RNF187Q5TA31 235 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 EMC10Q5UCC4 262 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 KDM7AQ6ZMT4 941 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 GPIHBP1Q8IV16 184 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC50Q8IVM0 306 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 GUF1Q8N442 669 aaKnown RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 N4BP2L2Q92802 583 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CAVIN3Q969G5 261 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CALR3Q96L12 384 aaKnown RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC17Q96LX7 622 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 NHEJ1Q9H9Q4 299 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 ODF2LQ9ULJ1 636 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 NPHP3-ACAD11A0A0J9YXS1 232 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 MEIS2O14770 477 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 ECE2O60344 883 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 RASSF9O75901 435 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 LSP1P33241 339 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 STAT3P40763 770 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 SLC1A4P43007 532 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 RBM5P52756 815 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 ZBED6P86452 979 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 COASYQ13057 564 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 NNTQ13423 1086 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 CDC37Q16543 378 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 VWA3BQ502W6 1294 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 ZNF572Q7Z3I7 529 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC155Q8N6L0 562 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 IDI2Q9BXS1 227 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 RAB34Q9BZG1 259 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 PCDHA12Q9UN75 941 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 APBA3O96018 575 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 SCP2P22307 547 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 PPP1R2P41236 205 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 CYP27A1Q02318 531 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 CEP85LQ5SZL2 805 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 TATDN1Q6P1N9 297 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 C2CD5Q86YS7 1000 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 NDST4Q9H3R1 872 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 ZNHIT6Q9NWK9 470 aaKnown RBP13.44□□□□□ -0.26
SHMT2-207ENST00000553837 TBC1D7Q9P0N9 293 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
SHMT2-207ENST00000553837 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 SRRM3A6NNA2 597 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-207ENST00000553837 POTECB2RU33 542 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 PRLRP16471 622 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 CHRNA5P30532 468 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 CRYMQ14894 314 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 HYIQ5T013 277 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 STRIP1Q5VSL9 837 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 KRT26Q7Z3Y9 468 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 RETREG2Q8NC44 543 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 ZNF473Q8WTR7 871 aaKnown RBP13.43□□□□□ -0.26
SHMT2-207ENST00000553837 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 PCDHA2Q9Y5H9 948 aa13.43□□□□□ -0.26
SHMT2-207ENST00000553837 GOLGA6L7A0A1B0GV03 622 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 PLSCR1O15162 318 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 TNFRSF8P28908 595 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 FIGNQ5HY92 759 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 CREG2Q8IUH2 290 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC13Q8IYE1 715 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC170Q8IYT3 715 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 MAGEC3Q8TD91 643 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 MRIQ9BWK5 157 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 TSGA10Q9BZW7 698 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 ACTR5Q9H9F9 607 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 KANSL2Q9H9L4 492 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 FAM207AQ9NSI2 230 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 SNX12Q9UMY4 172 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 F5H6K3 240 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 MED24O75448 989 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 SSBP05455 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 ATP1A2P50993 1020 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 ICA1Q05084 483 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 KLRC3Q07444 240 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 KIF5AQ12840 1032 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 PTGISQ16647 500 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms