RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 IDH1O75874 414 aaKnown RBP6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GNAI3P08754 354 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 VCAM1P19320 739 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 AVPR2P30518 371 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP5P45974 858 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ACLYP53396 1101 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L24Q0WX57 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCDC158Q5M9N0 1113 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCSAPQ6IQ19 270 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ATF7IPQ6VMQ6 1270 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RNF180Q86T96 592 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DPP9Q86TI2 863 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PLEKHM2Q8IWE5 1019 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ACER1Q8TDN7 264 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GDPD5Q8WTR4 605 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TTC9Q92623 222 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PKNOX2Q96KN3 472 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DBNDD2Q9BQY9 259 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 C2orf49Q9BVC5 232 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RPAP3Q9H6T3 665 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PIH1D3Q9NQM4 214 aaKnown RBP6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 BTBD7Q9P203 1132 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ATAD5Q96QE3 1844 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FAM186AA6NE01 2351 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FASNP49327 2511 aaKnown RBP6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PNMA6EA0A0J9YXQ4 647 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 F8W735 103 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MPHOSPH10O00566 681 aaKnown RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ATP9BO43861 1147 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MAP3K6O95382 1288 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TGFB1P01137 390 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GNAI2P04899 355 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CYP2E1P05181 493 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RARBP10826 455 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CYP7A1P22680 504 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ADORA2AP29274 412 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ZAP70P43403 619 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GP2P55259 537 aaKnown RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PLS1Q14651 629 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ABCB5Q2M3G0 1257 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CERKLQ49MI3 558 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ERICH6BQ5W0A0 696 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FAM126BQ8IXS8 530 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ABRAQ8N0Z2 381 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCDC82Q8N4S0 544 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FRAT1Q92837 279 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CALR3Q96L12 384 aaKnown RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TANGO6Q9C0B7 1094 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 IGSF5Q9NSI5 407 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TFIP11Q9UBB9 837 aaKnown RBP6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TNNQ9UQP3 1299 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 KMT2EQ8IZD2 1858 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GBF1Q92538 1859 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GPR179Q6PRD1 2367 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MROH7Q68CQ1 1323 aa6.74□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DMXL1Q9Y485 3027 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PALM3A6NDB9 673 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 M0R2N6 131 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 STRNO43815 780 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CD4P01730 458 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TARSP26639 723 aaKnown RBP6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CST5P28325 142 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP14P54578 494 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FZD5Q13467 585 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MTX1Q13505 466 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PUM1Q14671 1186 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TTLL4Q14679 1199 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TNNI3KQ59H18 835 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 IER5Q5VY09 327 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ELMSAN1Q6PJG2 1045 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CATSPERGQ6ZRH7 1159 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FRMD5Q7Z6J6 570 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TRIM50Q86XT4 487 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TMEM130Q8N3G9 435 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MAGEB6Q8N7X4 407 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SHCBP1Q8NEM2 672 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 KLHDC9Q8NEP7 349 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 NKD2Q969F2 451 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 WNT8AQ9H1J5 351 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CABP5Q9NP86 173 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DLL3Q9NYJ7 618 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SERPINB13Q9UIV8 391 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RNF114Q9Y508 228 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FPGT-TNNI3KV9GXZ4 949 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ELP1O95163 1332 aa6.73□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MAP1BP46821 2468 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 COL4A4P53420 1690 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SIPA1L1O43166 1804 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MYADML2A6NDP7 307 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SURF6O75683 361 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 BCAR3O75815 825 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 POLR3DP05423 398 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ERCC3P19447 782 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RARSP54136 660 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCL23P55773 120 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ZXDAP98168 799 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms