RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 TRIM75PA6NK02 468 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 TIMM44O43615 452 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 DDX58O95786 925 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 SDSP20132 328 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 ARHGAP4P98171 946 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 DMPKQ09013 629 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 SLMAPQ14BN4 828 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 TAF1CQ15572 869 aaPredicted RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 TTC39BQ5VTQ0 682 aaPredicted RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 SFMBT2Q5VUG0 894 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 ADCY4Q8NFM4 1077 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 GIMAP1Q8WWP7 306 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 RAPGEF4Q8WZA2 1011 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 CCDC47Q96A33 483 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 ZNF496Q96IT1 587 aaPredicted RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 DHRS1Q96LJ7 313 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 RNPC3Q96LT9 517 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 YIPF3Q9GZM5 350 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 IFT122Q9HBG6 1241 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 ANKIB1Q9P2G1 1089 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 E2F6O75461 281 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 RASGRP1O95267 797 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 RPSAP08865 295 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 PYGMP11217 842 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 TRIM21P19474 475 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 CHMLP26374 656 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 ALDH1B1P30837 517 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 EIF6P56537 245 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 TRIM29Q14134 588 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 SMC1AQ14683 1233 aaKnown RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 IQCB1Q15051 598 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 CCDC174Q6PII3 467 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 C16orf86Q6ZW13 317 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 NANOGNBQ7Z5D8 188 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 NIM1KQ8IY84 436 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 SYCP3Q8IZU3 236 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 SAMD3Q8N6K7 520 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 ENAHQ8N8S7 591 aaPredicted RBP4.46□□□□□ -1.7
RDH11-204ENST00000553578 C1orf216Q8TAB5 229 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 KIAA1524Q8TCG1 905 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 NEK9Q8TD19 979 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 TBC1D5Q92609 795 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 EXOC4Q96A65 974 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 ERO1AQ96HE7 468 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 EHD4Q9H223 541 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 VPS18Q9P253 973 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 HDAC6Q9UBN7 1215 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 MYH13Q9UKX3 1938 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 COL4A1P02462 1669 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 BBOX1O75936 387 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 KCNA2P16389 499 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ATP5JP18859 108 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 SH3BGRP55822 239 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 AMPD3Q01432 767 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 MTFR1Q15390 333 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ASIC2Q16515 512 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 PROSER3Q2NL68 480 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 THEMIS2Q5TEJ8 643 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 FAAH2Q6GMR7 532 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 KCNV1Q6PIU1 500 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 C6orf15Q6UXA7 325 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 BNC2Q6ZN30 1099 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 SPATC1Q76KD6 591 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ZNF34Q8IZ26 560 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 FAM81AQ8TBF8 368 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 RHPN1Q8TCX5 695 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 CABS1Q96KC9 395 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 DMRTB1Q96MA1 342 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 POLR3CQ9BUI4 534 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 RUBCNLQ9H714 662 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 TRPV5Q9NQA5 729 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ACAD8Q9UKU7 415 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 HRH3Q9Y5N1 445 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 CHUKO15111 745 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 CEP104O60308 925 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 DIAPH2O60879 1101 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 SLU7O95391 586 aaKnown RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 PCCAP05165 728 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 CYP19A1P11511 503 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 MX1P20591 662 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 MSX1P28360 303 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 IL6STP40189 918 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 PTPN12Q05209 780 aaKnown RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 KIF4BQ2VIQ3 1234 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 TMC4Q7Z404 712 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 RSPH1Q8WYR4 309 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 TBC1D31Q96DN5 1066 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 LSG1Q9H089 658 aaKnown RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 CD248Q9HCU0 757 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 PGAP2Q9UHJ9 254 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ANKRD31Q8N7Z5 1873 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 PI4KAP2A4QPH2 592 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ZBTB39O15060 712 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ERC2O15083 957 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 SGSM2O43147 1006 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 MBD4O95243 580 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 LDHCP07864 332 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 PF4V1P10720 104 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms