RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TNPO1Q92973 898 aaKnown RBP20.87■□□□□ 0.93
CPSF2-202ENST00000553427 FAM20AQ96MK3 541 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 TEKT3Q9BXF9 490 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.87■□□□□ 0.93
CPSF2-202ENST00000553427 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
CPSF2-202ENST00000553427 LAMA3Q16787 3333 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 TANC1Q9C0D5 1861 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 CCNT1O60563 726 aaKnown RBP20.86■□□□□ 0.93
CPSF2-202ENST00000553427 PSAPP07602 524 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 SFNP31947 248 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 RFC2P35250 354 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 JAK3P52333 1124 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 EPHB4P54760 987 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 GUCY1B3Q02153 619 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 PPFIA1Q13136 1202 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 CCDC60Q8IWA6 550 aaPredicted RBP20.86■□□□□ 0.93
CPSF2-202ENST00000553427 LMBR1Q8WVP7 490 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 ATP6V0A1Q93050 837 aa20.86■□□□□ 0.93
CPSF2-202ENST00000553427 IGSF9BQ9UPX0 1349 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 CAND2O75155 1236 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 PFKMP08237 780 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 CSF2RAP15509 400 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 MARK3P27448 753 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 ZNF200P98182 395 aaPredicted RBP20.85■□□□□ 0.93
CPSF2-202ENST00000553427 PLCB4Q15147 1175 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 LRIT3Q3SXY7 679 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 PSRC1Q6PGN9 363 aaPredicted RBP20.85■□□□□ 0.93
CPSF2-202ENST00000553427 RETREG2Q8NC44 543 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 UIMC1Q96RL1 719 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 IL23AQ9NPF7 189 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 ZNF302Q9NR11 478 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 SETD4Q9NVD3 440 aa20.85■□□□□ 0.93
CPSF2-202ENST00000553427 MAFBQ9Y5Q3 323 aaPredicted RBP20.85■□□□□ 0.93
CPSF2-202ENST00000553427 MBLAC1A4D2B0 266 aaPredicted RBP20.84■□□□□ 0.93
CPSF2-202ENST00000553427 RRN3P2A6NIE6 340 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 BACH1O14867 736 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 PARNO95453 639 aaKnown RBP20.84■□□□□ 0.93
CPSF2-202ENST00000553427 IQCF3P0C7M6 154 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 SELPP16109 830 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 CCL23P55773 120 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 ORC2Q13416 577 aaPredicted RBP20.84■□□□□ 0.93
CPSF2-202ENST00000553427 GRIK4Q16099 956 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 ATP8B4Q8TF62 1192 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 UNC45AQ9H3U1 944 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 DISC1Q9NRI5 854 aa20.84■□□□□ 0.93
CPSF2-202ENST00000553427 TREHO43280 583 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 CKBP12277 381 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 U2AF2P26368 475 aaKnown RBP eCLIP20.83■□□□□ 0.93
CPSF2-202ENST00000553427 GJB2P29033 226 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 TRAPPC10P48553 1259 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 PPP2R5CQ13362 524 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 TAF2Q6P1X5 1199 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 PDXDC2PQ6P474 469 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 LRRC8DQ7L1W4 858 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 RPAINQ86UA6 219 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 POTEDQ86YR6 584 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 NOSTRINQ8IVI9 506 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 SLFN12Q8IYM2 578 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 RPUSD2Q8IZ73 545 aaKnown RBP20.83■□□□□ 0.93
CPSF2-202ENST00000553427 HAS1Q92839 578 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 WNT8BQ93098 351 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 VAV3Q9UKW4 847 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 SMC3Q9UQE7 1217 aa20.83■□□□□ 0.93
CPSF2-202ENST00000553427 COL1A2P08123 1366 aa20.83■□□□□ 0.92
CPSF2-202ENST00000553427 POTEB3A0JP26 581 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 HBP1O60381 514 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 RPLP2P05387 115 aaKnown RBP20.82■□□□□ 0.92
CPSF2-202ENST00000553427 INSRRP14616 1297 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 SHHQ15465 462 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 TMEM240Q5SV17 173 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 C9orf50Q5SZB4 431 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 SWSAP1Q6NVH7 229 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 TRAF7Q6Q0C0 670 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 POTEBQ6S5H4 581 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 C16orf59Q7L2K0 433 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 GJA10Q969M2 543 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 SNX21Q969T3 373 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 VWCEQ96DN2 955 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 FAM167AQ96KS9 214 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 TUBE1Q9UJT0 475 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 TRPC6Q9Y210 931 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 SAMM50Q9Y512 469 aa20.82■□□□□ 0.92
CPSF2-202ENST00000553427 NEMFO60524 1076 aa20.81■□□□□ 0.92
CPSF2-202ENST00000553427 MARCH8Q5T0T0 291 aa20.81■□□□□ 0.92
CPSF2-202ENST00000553427 RASIP1Q5U651 963 aa20.81■□□□□ 0.92
CPSF2-202ENST00000553427 SCLYQ96I15 445 aa20.81■□□□□ 0.92
CPSF2-202ENST00000553427 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.92
CPSF2-202ENST00000553427 GABBR1Q9UBS5 961 aa20.81■□□□□ 0.92
CPSF2-202ENST00000553427 TRIP12Q14669 1992 aaPredicted RBP20.8■□□□□ 0.92
CPSF2-202ENST00000553427 WNT7AO00755 349 aa20.8■□□□□ 0.92
CPSF2-202ENST00000553427 CHMP2AO43633 222 aa20.8■□□□□ 0.92
CPSF2-202ENST00000553427 BAG4O95429 457 aaKnown RBP20.8■□□□□ 0.92
CPSF2-202ENST00000553427 ATP4AP20648 1035 aa20.8■□□□□ 0.92
CPSF2-202ENST00000553427 GNL2Q13823 731 aaKnown RBP20.8■□□□□ 0.92
CPSF2-202ENST00000553427 MIER3Q7Z3K6 550 aa20.8■□□□□ 0.92
CPSF2-202ENST00000553427 BBXQ8WY36 941 aaPredicted RBP20.8■□□□□ 0.92
CPSF2-202ENST00000553427 INTS4Q96HW7 963 aaKnown RBP20.8■□□□□ 0.92
CPSF2-202ENST00000553427 KIF28PB7ZC32 967 aa20.79■□□□□ 0.92
CPSF2-202ENST00000553427 K7ELQ4 463 aaPredicted RBP20.79■□□□□ 0.92
CPSF2-202ENST00000553427 CXCL10P02778 98 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms