RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TRIM71Q2Q1W2 868 aaKnown RBP17.37■□□□□ 0.37
SHMT2-204ENST00000553324 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 RSPH3Q86UC2 560 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 LENG9Q96B70 501 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 PCYT2Q99447 389 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 PCDHA10Q9Y5I2 948 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 RSPH10B2B2RC85 870 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 MSH4O15457 936 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 EDIL3O43854 480 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 BAIAP3O94812 1187 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 CCNE2O96020 404 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 PSAPP07602 524 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 RSPH10BP0C881 870 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
SHMT2-204ENST00000553324 KRT2P35908 639 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
SHMT2-204ENST00000553324 GRIK4Q16099 956 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 PPP4R3AQ6IN85 833 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 NEK8Q86SG6 692 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 LMBR1Q8WVP7 490 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 ZNF302Q9NR11 478 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 TRPC6Q9Y210 931 aa17.36■□□□□ 0.37
SHMT2-204ENST00000553324 TMEM265A0A087WTH1 108 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 POTEB3A0JP26 581 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 WDR64B1ANS9 1081 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 HBP1O60381 514 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 GAS7O60861 476 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 EFCAB14O75071 495 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 CXCL10P02778 98 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 INSRRP14616 1297 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 SFNP31947 248 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 INF2Q27J81 1249 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 ZNF697Q5TEC3 545 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 SWSAP1Q6NVH7 229 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 PDXDC2PQ6P474 469 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 POTEBQ6S5H4 581 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 PHOSPHO2Q8TCD6 241 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 SLC5A5Q92911 643 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 VWCEQ96DN2 955 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 MBOAT7Q96N66 472 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 TEKT3Q9BXF9 490 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 DDX25Q9UHL0 483 aaKnown RBP17.35■□□□□ 0.37
SHMT2-204ENST00000553324 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
SHMT2-204ENST00000553324 MBLAC1A4D2B0 266 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-204ENST00000553324 ZBBXA8MT70 800 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 JAK2O60674 1132 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 MCM2P49736 904 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 JAK3P52333 1124 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 PLCB4Q15147 1175 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
SHMT2-204ENST00000553324 LETM2Q2VYF4 491 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 LRCH2Q5VUJ6 765 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 CNKSR3Q6P9H4 555 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 PIK3AP1Q6ZUJ8 805 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 CCDC83Q8IWF9 413 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 RDM1Q8NG50 284 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 ATP8B4Q8TF62 1192 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 WNT8BQ93098 351 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 GJB4Q9NTQ9 266 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 CXXC1Q9P0U4 656 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-204ENST00000553324 MSRAQ9UJ68 235 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
SHMT2-204ENST00000553324 MAFBQ9Y5Q3 323 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-204ENST00000553324 ABHD14A-ACY1A0A1B0GW23 586 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 NBNO60934 754 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 MMP1P03956 469 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 IKBKEQ14164 716 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 GPNMBQ14956 572 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 RAB30Q15771 203 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 TRAF7Q6Q0C0 670 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 FAM20AQ96MK3 541 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 DISC1Q9NRI5 854 aa17.33■□□□□ 0.36
SHMT2-204ENST00000553324 TBX3O15119 743 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 CCNT1O60563 726 aaKnown RBP17.32■□□□□ 0.36
SHMT2-204ENST00000553324 PSMD10O75832 226 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 TDP2O95551 362 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
SHMT2-204ENST00000553324 KCNJ6P48051 423 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 IGBP1P78318 339 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 FAM26DQ5JW98 314 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 MARCH8Q5T0T0 291 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 KRT40Q6A162 431 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 CCDC60Q8IWA6 550 aaPredicted RBP17.32■□□□□ 0.36
SHMT2-204ENST00000553324 NME8Q8N427 588 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 OXER1Q8TDS5 423 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 BBXQ8WY36 941 aaPredicted RBP17.32■□□□□ 0.36
SHMT2-204ENST00000553324 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 UIMC1Q96RL1 719 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 SLC9A7Q96T83 725 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 NRBP2Q9NSY0 501 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
SHMT2-204ENST00000553324 PCDHA2Q9Y5H9 948 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms