RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.45□□□□□ -0.58
CALCOCO1-222ENST00000553154 DDX39AO00148 427 aaKnown RBP11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 EML1O00423 815 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 PITPNM1O00562 1244 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 TLR3O15455 904 aaKnown RBP11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 GAS7O60861 476 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 TRAPPC10P48553 1259 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 ORC2Q13416 577 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 UGCGQ16739 394 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 UTP14CQ5TAP6 766 aaKnown RBP11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 LRCH2Q5VUJ6 765 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 MFSD5Q6N075 450 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 C16orf59Q7L2K0 433 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 RDM1Q8NG50 284 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 BADQ92934 168 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 TMEM39AQ9NV64 488 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 ERAP1Q9NZ08 941 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 ZNF215Q9UL58 517 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 SMC3Q9UQE7 1217 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 KIF3AQ9Y496 699 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 TANC1Q9C0D5 1861 aa11.44□□□□□ -0.58
CALCOCO1-222ENST00000553154 NRCAMQ92823 1304 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 WDR64B1ANS9 1081 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 CCNT1O60563 726 aaKnown RBP11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 SFNP31947 248 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 CYP2C18P33260 490 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 SLC26A2P50443 739 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 STAT5BP51692 787 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 JAK3P52333 1124 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 PTK7Q13308 1070 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 SAFBQ15424 915 aaKnown RBP eCLIP11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 PTGISQ16647 500 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 FAM47CQ5HY64 1035 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 MIS18BP1Q6P0N0 1132 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 C7orf31Q8N865 590 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 ATP8B4Q8TF62 1192 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 CEP89Q96ST8 783 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 HIPK3Q9H422 1215 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 PRDM5Q9NQX1 630 aaPredicted RBP11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 DISC1Q9NRI5 854 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 SETD4Q9NVD3 440 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 PCDHA10Q9Y5I2 948 aa11.43□□□□□ -0.58
CALCOCO1-222ENST00000553154 A0A1W2PPC1 479 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 C17orf102A2RUQ5 167 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 TREHO43280 583 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 NEMFO60524 1076 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 NBR1Q14596 966 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 MBTPS1Q14703 1052 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 TARBP2Q15633 366 aaKnown RBP11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 GRIK4Q16099 956 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 RASIP1Q5U651 963 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 LINC01465Q8N7H1 131 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 ZNF302Q9NR11 478 aa11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 WRAP73Q9P2S5 460 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-222ENST00000553154 COL1A2P08123 1366 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 RBAK-RBAKDNI3L0D1 243 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 PSAPP07602 524 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 INSRRP14616 1297 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 CSF2RAP15509 400 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 RAG1P15918 1043 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 SYT1P21579 422 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 MARK3P27448 753 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 FPGSQ05932 587 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 RESTQ13127 1097 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 PPFIA1Q13136 1202 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 FAM26DQ5JW98 314 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 RUFY4Q6ZNE9 571 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 GLG1Q92896 1179 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 ZBTB10Q96DT7 871 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 MTMR6Q9Y217 621 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
CALCOCO1-222ENST00000553154 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 CHMP2AO43633 222 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 HBP1O60381 514 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 CAND2O75155 1236 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 C22orf31O95567 290 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 CXCL10P02778 98 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 CKBP12277 381 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 MCM7P33993 719 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 PRKCEQ02156 737 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 MGAT3Q09327 533 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 CALCRLQ16602 461 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 C9orf50Q5SZB4 431 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 FAM160B1Q5W0V3 765 aa11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 LARP1BQ659C4 914 aaKnown RBP11.4□□□□□ -0.58
CALCOCO1-222ENST00000553154 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms