RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 ADM5C9JUS6 153 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 HOXA7P31268 230 aaPredicted RBP10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 GTF2F1P35269 517 aaKnown RBP eCLIP10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 BAATQ14032 418 aaPredicted RBP10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 COG2Q14746 738 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 ZCWPW2Q504Y3 356 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 OR8K1Q8NGG5 319 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 DCPSQ96C86 337 aaKnown RBP10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 RIT2Q99578 217 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 CHP1Q99653 195 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 DOCK5Q9H7D0 1870 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 MMRN2Q9H8L6 949 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
RAB3IP-218ENST00000553099 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 A0A0U1RQJ8 604 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 GOLGA6L9A6NEM1 432 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 NR2F2P24468 414 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 GNG11P61952 73 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 ITGB3BPQ13352 177 aaPredicted RBP10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 EPHA7Q15375 998 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 MYCT1Q8N699 235 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 NACC1Q96RE7 527 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 KCTD10Q9H3F6 313 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 PXMP2Q9NR77 195 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 CAPN11Q9UMQ6 739 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 PTPRFP10586 1907 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 FDX1P10109 184 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 BCRP11274 1271 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 DSG3P32926 999 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 ADAM9Q13443 819 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 VGLL4Q14135 290 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 TRIM65Q6PJ69 517 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 MAEAQ7L5Y9 396 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 PDCD2LQ9BRP1 358 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 AGO4Q9HCK5 861 aaKnown RBP10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 ADARB2Q9NS39 739 aaKnown RBP10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 OTOFQ9HC10 1997 aa10.04□□□□□ -0.8
RAB3IP-218ENST00000553099 ARHGEF35A5YM69 484 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 TMEM132BQ14DG7 1078 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 KNOP1Q1ED39 458 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 ARHGAP29Q52LW3 1261 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 CNKSR2Q8WXI2 1034 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 C12orf42Q96LP6 360 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 CCDC43Q96MW1 224 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 ERGIC2Q96RQ1 377 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 SH2D3AQ9BRG2 576 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 JADE2Q9NQC1 790 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 MAP3K20Q9NYL2 800 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 PNMA2Q9UL42 364 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 ZNF214Q9UL59 606 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 UBIAD1Q9Y5Z9 338 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 CSADQ9Y600 493 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 CETN3O15182 167 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 NMT1P30419 496 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 KCNA1Q09470 495 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 CATSPERGQ6ZRH7 1159 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 C1orf186Q6ZWK4 172 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 ZNF397Q8NF99 534 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 WDR24Q96S15 920 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 DNAJC7Q99615 494 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 SYT17Q9BSW7 474 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 TTYH3Q9C0H2 523 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 PARVGQ9HBI0 331 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 ZNHIT6Q9NWK9 470 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 AFG3L2Q9Y4W6 797 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 V9GYY5 206 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 PHLPP2Q6ZVD8 1323 aa10.03□□□□□ -0.8
RAB3IP-218ENST00000553099 RASSF10A6NK89 507 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 EPHB6O15197 1021 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 DHX15O43143 795 aaKnown RBP10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 PPP1R12BO60237 982 aaPredicted RBP10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 ATP9AO75110 1047 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 TUBB4AP04350 444 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 YBX3P16989 372 aaKnown RBP eCLIP10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 GHRHRQ02643 423 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 ZC2HC1CQ53FD0 456 aaPredicted RBP10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 C9orf131Q5VYM1 1079 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 B3GNT9Q6UX72 402 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 PPP4R3CPQ6ZMV5 832 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 KSR1Q8IVT5 923 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 RETREG2Q8NC44 543 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 REPS2Q8NFH8 660 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 CEP63Q96MT8 703 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 CRACR2AQ9BSW2 395 aa10.02□□□□□ -0.8
RAB3IP-218ENST00000553099 TEX13BQ9BXU2 312 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms