RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 NOX5Q96PH1 765 aa8.07□□□□□ -1.12
BEST3-212ENST00000553096 DUSP9Q99956 384 aaKnown RBP8.07□□□□□ -1.12
BEST3-212ENST00000553096 EPN3Q9H201 632 aa8.07□□□□□ -1.12
BEST3-212ENST00000553096 DMGDHQ9UI17 866 aaKnown RBP8.07□□□□□ -1.12
BEST3-212ENST00000553096 SUGT1Q9Y2Z0 365 aa8.07□□□□□ -1.12
BEST3-212ENST00000553096 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
BEST3-212ENST00000553096 ATAD5Q96QE3 1844 aa8.07□□□□□ -1.12
BEST3-212ENST00000553096 CCDC194A0A1B0GVG4 234 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 HMGB1P1B2RPK0 211 aaPredicted RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 PPP1R11O60927 126 aaPredicted RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 PDE6BP35913 854 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 PSMD2Q13200 908 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 TTMPQ5BVD1 217 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 ZC3H12CQ9C0D7 883 aaKnown RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 RIOX1Q9H6W3 641 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 USP40Q9NVE5 1235 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 SSU72P8A0A1W2PR75 194 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 AKR1B10O60218 316 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 CHRNA5P30532 468 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 ALDH1B1P30837 517 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 CYP27A1Q02318 531 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 SKIDA1Q1XH10 827 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 SH3BP5LQ7L8J4 393 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 GDF3Q9NR23 364 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 TFR2Q9UP52 801 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 CAPN6Q9Y6Q1 641 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 CAPN7Q9Y6W3 813 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 BRCA1P38398 1863 aaKnown RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 GOLGA6L10A6NI86 522 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 RASSF10A6NK89 507 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 MOCS3O95396 460 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 MAGEA1P43355 309 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 NAPAP54920 295 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 PDE4DQ08499 809 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 CCDC15Q0P6D6 951 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 MIIPQ5JXC2 388 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 C2CD5Q86YS7 1000 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 PHC3Q8NDX5 983 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 ZIM3Q96PE6 472 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 C7orf25Q9BPX7 421 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 LZTS2Q9BRK4 669 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 ZNF287Q9HBT7 754 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 GPBP1L1Q9HC44 474 aaPredicted RBP8.06□□□□□ -1.12
BEST3-212ENST00000553096 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 PNMA2Q9UL42 364 aa8.06□□□□□ -1.12
BEST3-212ENST00000553096 PPP1R37O75864 691 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 LSP1P33241 339 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 RDXP35241 583 aaKnown RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 CRKP46108 304 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 PDCLQ13371 301 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 MAN2A1Q16706 1144 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 VWA3BQ502W6 1294 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 DACT2Q5SW24 774 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 FOXR2Q6PJQ5 311 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 HHIPL2Q6UWX4 724 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 LRIG3Q6UXM1 1119 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 TSEN2Q8NCE0 465 aaKnown RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 C7orf43Q8WVR3 580 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ARL8AQ96BM9 186 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ACTR5Q9H9F9 607 aaPredicted RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 ZNF219Q9P2Y4 722 aaPredicted RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 FAM198AQ9UFP1 575 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 SUN2Q9UH99 717 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 PCDHGA4Q9Y5G9 962 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 GOLGA6L7A0A1B0GV03 622 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 RBM47A0AV96 593 aaKnown RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 SMCO2A6NFE2 343 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 DDTLA6NHG4 134 aaPredicted RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 ZNF263O14978 683 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ECE2O60344 883 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 PPFIA2O75334 1257 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 NR1D1P20393 614 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 EIF4A3P38919 411 aaKnown RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 FNTAP49354 379 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ORC2Q13416 577 aaPredicted RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 ANKRD40Q6AI12 368 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 PPP4R3AQ6IN85 833 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 NFRKBQ6P4R8 1299 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 KCNV1Q6PIU1 500 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 CCDC50Q8IVM0 306 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 IQCKQ8N0W5 287 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 HDAC7Q8WUI4 952 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 COA7Q96BR5 231 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ATP6V1G3Q96LB4 118 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ZDHHC15Q96MV8 337 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 CCDC43Q96MW1 224 aaKnown RBP8.05□□□□□ -1.12
BEST3-212ENST00000553096 MLXIPQ9HAP2 919 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 ARHGAP20Q9P2F6 1191 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 SERPINB13Q9UIV8 391 aa8.05□□□□□ -1.12
BEST3-212ENST00000553096 TMCO5BA8MYB1 307 aa8.04□□□□□ -1.12
BEST3-212ENST00000553096 CHUKO15111 745 aa8.04□□□□□ -1.12
BEST3-212ENST00000553096 PEX14O75381 377 aa8.04□□□□□ -1.12
BEST3-212ENST00000553096 SMARCA1P28370 1054 aa8.04□□□□□ -1.12
BEST3-212ENST00000553096 MATR3P43243 847 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms