RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 RTEL1Q9NZ71 1219 aa9.85□□□□□ -0.83
CDK4-213ENST00000552713 ZSWIM5Q9P217 1185 aa9.85□□□□□ -0.83
CDK4-213ENST00000552713 USP15Q9Y4E8 981 aaPredicted RBP9.85□□□□□ -0.83
CDK4-213ENST00000552713 PCDHA1Q9Y5I3 950 aa9.85□□□□□ -0.83
CDK4-213ENST00000552713 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 NOP56O00567 594 aaKnown RBP9.84□□□□□ -0.83
CDK4-213ENST00000552713 PDGFBP01127 241 aaPredicted RBP9.84□□□□□ -0.83
CDK4-213ENST00000552713 NRIP1P48552 1158 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 SP4Q02446 784 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 COASYQ13057 564 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 PAN2Q504Q3 1202 aaKnown RBP9.84□□□□□ -0.83
CDK4-213ENST00000552713 SUGP1Q8IWZ8 645 aaKnown RBP9.84□□□□□ -0.83
CDK4-213ENST00000552713 EFHBQ8N7U6 833 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 KLHL23Q8NBE8 558 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 VN1R2Q8NFZ6 395 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 RPGRIP1Q96KN7 1286 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 RNF41Q9H4P4 317 aaPredicted RBP9.84□□□□□ -0.83
CDK4-213ENST00000552713 AGO3Q9H9G7 860 aaKnown RBP9.84□□□□□ -0.83
CDK4-213ENST00000552713 MAD2L2Q9UI95 211 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 RWDD3Q9Y3V2 267 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 WDR81Q562E7 1941 aa9.84□□□□□ -0.83
CDK4-213ENST00000552713 SPATA31C2B4DYI2 1134 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 KLRF2D3W0D1 207 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 H0Y858 1186 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 ZNF213O14771 459 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 ZBTB5O15062 677 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 AVPR2P30518 371 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 ICAM3P32942 547 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 SIGLEC14Q08ET2 396 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 FBXO47Q5MNV8 452 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 ANKRD45Q5TZF3 282 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 HOMER1Q86YM7 354 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 POF1BQ8WVV4 589 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 DNAJB3Q8WWF6 145 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 P2RX5Q93086 422 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 INPP4AQ96PE3 977 aaPredicted RBP9.83□□□□□ -0.84
CDK4-213ENST00000552713 PIGSQ96S52 555 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 SCUBE2Q9NQ36 999 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 TLR9Q9NR96 1032 aa9.83□□□□□ -0.84
CDK4-213ENST00000552713 MAP3K20Q9NYL2 800 aaKnown RBP9.83□□□□□ -0.84
CDK4-213ENST00000552713 FRMPD4Q14CM0 1322 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 PALM3A6NDB9 673 aaPredicted RBP9.82□□□□□ -0.84
CDK4-213ENST00000552713 GCOM1H8Y6P7 765 aaPredicted RBP9.82□□□□□ -0.84
CDK4-213ENST00000552713 PER2O15055 1255 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 CYTH3O43739 400 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 PPFIA3O75145 1194 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 POLR2MP0CAP2 368 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 GNAT1P11488 350 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 CD52P31358 61 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 SEC23AQ15436 765 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 MARCH8Q5T0T0 291 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 ASCL5Q7RTU5 278 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 SUSD6Q92537 303 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 ATOH1Q92858 354 aaPredicted RBP9.82□□□□□ -0.84
CDK4-213ENST00000552713 PRRX2Q99811 253 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 PHF7Q9BWX1 381 aaPredicted RBP9.82□□□□□ -0.84
CDK4-213ENST00000552713 SENP2Q9HC62 589 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 CDY2AQ9Y6F7 541 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 MYH9P35579 1960 aaKnown RBP9.82□□□□□ -0.84
CDK4-213ENST00000552713 NRCAMQ92823 1304 aa9.82□□□□□ -0.84
CDK4-213ENST00000552713 MBLAC1A4D2B0 266 aaPredicted RBP9.81□□□□□ -0.84
CDK4-213ENST00000552713 ATP9AO75110 1047 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 SDSP20132 328 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 SP100P23497 879 aaPredicted RBP9.81□□□□□ -0.84
CDK4-213ENST00000552713 MARK3P27448 753 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 NEDD9Q14511 834 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 PKN1Q16512 942 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 TSHZ1Q6ZSZ6 1077 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 CYB5R4Q7L1T6 521 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 CMTR2Q8IYT2 770 aaKnown RBP9.81□□□□□ -0.84
CDK4-213ENST00000552713 SAMD3Q8N6K7 520 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 ATP8B4Q8TF62 1192 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 RILPL2Q969X0 211 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 RIOX1Q9H6W3 641 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 CDH22Q9UJ99 828 aa9.81□□□□□ -0.84
CDK4-213ENST00000552713 ZNF215Q9UL58 517 aaPredicted RBP9.81□□□□□ -0.84
CDK4-213ENST00000552713 GSTTP1A0A1W2PQM5 241 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 FIBPO43427 364 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 ARP10275 920 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
CDK4-213ENST00000552713 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
CDK4-213ENST00000552713 ERVFC1P60507 584 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 MRPS6P82932 125 aaKnown RBP9.8□□□□□ -0.84
CDK4-213ENST00000552713 TMEM62Q0P6H9 643 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 PPFIA1Q13136 1202 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 GRIK4Q16099 956 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 PTPN21Q16825 1174 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 GNPTABQ3T906 1256 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 NAALADL2Q58DX5 795 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 IFIT1BQ5T764 474 aaKnown RBP9.8□□□□□ -0.84
CDK4-213ENST00000552713 TAF2Q6P1X5 1199 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 PIBF1Q8WXW3 757 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 APOL5Q9BWW9 433 aa9.8□□□□□ -0.84
CDK4-213ENST00000552713 FAM49AQ9H0Q0 323 aaPredicted RBP9.8□□□□□ -0.84
CDK4-213ENST00000552713 TMX1Q9H3N1 280 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms