RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ADRA2BP18089 450 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 MYL7Q01449 175 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 NUP58Q9BVL2 599 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 AGTPBP1Q9UPW5 1226 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 SLC9A1P19634 815 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 ATP1A1P05023 1023 aaKnown RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 COPB2P35606 906 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 TRIM14Q14142 442 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 HOOK3Q86VS8 718 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 REEP2Q9BRK0 252 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 AKT3Q9Y243 479 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 ARL6IP4Q66PJ3 421 aaKnown RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 HDXQ7Z353 690 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 TC2NQ8N9U0 490 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 EPB41L5Q9HCM4 733 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 PPANQ9NQ55 473 aaKnown RBP11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 PCDHA13Q9Y5I0 950 aa11.78□□□□□ -0.52
TGFBR1-209ENST00000552516 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 A0A1W2PRG0 241 aa11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 DPP9Q86TI2 863 aa11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 C7orf31Q8N865 590 aa11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 ATG4CQ96DT6 458 aa11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.52
TGFBR1-209ENST00000552516 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 GYPCP04921 128 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 SETQ01105 290 aaPredicted RBP11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 PPP1R21Q6ZMI0 780 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 AFPP02771 609 aaKnown RBP11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 AK8Q96MA6 479 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 HEMGNQ9BXL5 484 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 ABCB6Q9NP58 842 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 CDC23Q9UJX2 597 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 NFIBO00712 420 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 ATMINO43313 823 aaPredicted RBP11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 CCDC172P0C7W6 258 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
TGFBR1-209ENST00000552516 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 H2AFZP0C0S5 128 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 IFI16Q16666 785 aaKnown RBP11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 STRIP1Q5VSL9 837 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 DCAF15Q66K64 600 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 H2AFVQ71UI9 128 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 GLYCTKQ8IVS8 523 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 WDR11Q9BZH6 1224 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 RFX7Q2KHR2 1363 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 ACOT2P49753 483 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 SARM1Q6SZW1 724 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 UNC13DQ70J99 1090 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 NWD1Q149M9 1564 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 PALMO75781 387 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 NR3C1P04150 777 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 EEF1GP26641 437 aaKnown RBP11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 MED24O75448 989 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 CDC25BP30305 580 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 KCNA1Q09470 495 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 GNPTABQ3T906 1256 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 ANKRD42Q8N9B4 389 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 LGALS16A8MUM7 142 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 TISP43B9A030 160 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 ABL1P00519 1130 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 CALCAP01258 141 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 ARP10275 920 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 NCAPHQ15003 741 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 HAUS4Q9H6D7 363 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 FAN1Q9Y2M0 1017 aa11.76□□□□□ -0.53
TGFBR1-209ENST00000552516 PIK3CAP42336 1068 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 CXCL9Q07325 125 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 GLT8D2Q9H1C3 349 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 COG2Q14746 738 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 CEP85LQ5SZL2 805 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 SHMT1P34896 483 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 IFNAR2P48551 515 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 TNNC1P63316 161 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 NACC1Q96RE7 527 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 TAAR1Q96RJ0 339 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 AGXT2Q9BYV1 514 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms