RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	PAWR	Q96IZ0	340 aa	Known RBP	5	□□□□□ -1.61
USP44-208	ENST00000552440		Q96M66	194 aa		5	□□□□□ -1.61
USP44-208	ENST00000552440	CDC6	Q99741	560 aa		5	□□□□□ -1.61
USP44-208	ENST00000552440	EIF2AK1	Q9BQI3	630 aa	Known RBP	5	□□□□□ -1.61
USP44-208	ENST00000552440	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5	□□□□□ -1.61
USP44-208	ENST00000552440	KMT5A	Q9NQR1	393 aa		5	□□□□□ -1.61
USP44-208	ENST00000552440	ZBTB21	Q9ULJ3	1066 aa		5	□□□□□ -1.61
USP44-208	ENST00000552440	TRAV20	A0A0B4J274	112 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	ANKRD34B	A5PLL1	514 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440		J3KRW8	73 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	NCAN	O14594	1321 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	NPTXR	O95502	500 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	ZGLP1	P0C6A0	271 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	PF4V1	P10720	104 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	CLK1	P49759	484 aa	Known RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	AK2	P54819	239 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	ADCY1	Q08828	1119 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	CLEC16A	Q2KHT3	1053 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	PKN3	Q6P5Z2	889 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	LDHAL6A	Q6ZMR3	332 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	C1orf122	Q6ZSJ8	110 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	PNMA8A	Q86V59	439 aa	Predicted RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	SCUBE1	Q8IWY4	988 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	DHRS1	Q96LJ7	313 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	SLC6A18	Q96N87	628 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	DPH2	Q9BQC3	489 aa	Predicted RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	MRPL4	Q9BYD3	311 aa	Known RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	SEZ6L	Q9BYH1	1024 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	RNF32	Q9H0A6	362 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	RASSF1	Q9NS23	344 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	SUCO	Q9UBS9	1254 aa	Known RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	DDX20	Q9UHI6	824 aa	Known RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	ANKRD6	Q9Y2G4	727 aa		4.99	□□□□□ -1.61
USP44-208	ENST00000552440	YBX2	Q9Y2T7	364 aa	Known RBP	4.99	□□□□□ -1.61
USP44-208	ENST00000552440	TEX51	A0A1B0GUA7	166 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	CAPNS1	P04632	268 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	EPHX1	P07099	455 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	ATIC	P31939	592 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	PPP2R2A	P63151	447 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	GTF2H3	Q13889	308 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.98	□□□□□ -1.61
USP44-208	ENST00000552440	OLFML2B	Q68BL8	750 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	OTOP3	Q7RTS5	596 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	CCDC74B	Q96LY2	380 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	MYCBP	Q99417	103 aa	Predicted RBP	4.98	□□□□□ -1.61
USP44-208	ENST00000552440	TTC1	Q99614	292 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	MYD88	Q99836	296 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	AARSD1	Q9BTE6	412 aa	Known RBP	4.98	□□□□□ -1.61
USP44-208	ENST00000552440	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.98	□□□□□ -1.61
USP44-208	ENST00000552440	ANLN	Q9NQW6	1124 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440	FAM86C1	Q9NVL1	165 aa		4.98	□□□□□ -1.61
USP44-208	ENST00000552440		K7ENM7	598 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	HRK	O00198	91 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	RGS13	O14921	159 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	UBOX5	O94941	541 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	SNUPN	O95149	360 aa	Known RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	NAT2	P11245	290 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	NCAM1	P13591	858 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	POU3F2	P20265	443 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ENDOU	P21128	410 aa	Known RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	LPO	P22079	712 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	CYP2C19	P33261	490 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	TSPAN7	P41732	249 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	CTSW	P56202	376 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ERVFC1	P60507	584 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	RNF4	P78317	190 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	DLG4	P78352	724 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	SEPT2	Q15019	361 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ABCB5	Q2M3G0	1257 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ERICH6B	Q5W0A0	696 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	RNF111	Q6ZNA4	994 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	MYLK4	Q86YV6	388 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	NDUFAF2	Q8N183	169 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	NAXE	Q8NCW5	288 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	FRS2	Q8WU20	508 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	NELL1	Q92832	810 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	INTS4	Q96HW7	963 aa	Known RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	IPO9	Q96P70	1041 aa	Known RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	NELL2	Q99435	816 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	HAUS7	Q99871	368 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ZNF552	Q9H707	407 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	SH3GLB2	Q9NR46	395 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	CLGN	O14967	610 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	TP53	P04637	393 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ITGAV	P06756	1048 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ASGR2	P07307	311 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	FGFR1	P11362	822 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	MAPK9	P45984	424 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ALDH5A1	P51649	535 aa	Predicted RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	SEPT7	Q16181	437 aa	Known RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	TUBB8	Q3ZCM7	444 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	TDRD10	Q5VZ19	366 aa	Known RBP	4.97	□□□□□ -1.61
USP44-208	ENST00000552440	ZNF227	Q86WZ6	799 aa		4.97	□□□□□ -1.61
USP44-208	ENST00000552440	PHACTR4	Q8IZ21	702 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms