RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 GAS2O43903 313 aaKnown RBP9.38□□□□□ -0.91
BEST3-211ENST00000552295 WNT11O96014 354 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 GH2P01242 217 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 PCSK2P16519 638 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 ARL4DP49703 201 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 RCAN1P53805 252 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 SCRN1Q12765 414 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 STK3Q13188 491 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 SUPT20HL1Q3ZLR7 823 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 MAP1SQ66K74 1059 aaPredicted RBP9.38□□□□□ -0.91
BEST3-211ENST00000552295 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 ATCAYQ86WG3 371 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 LDHDQ86WU2 507 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 RAB11FIP4Q86YS3 637 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 GTF3C6Q969F1 213 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 TMEM47Q9BQJ4 181 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 MYL10Q9BUA6 226 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 ZNF341Q9BYN7 854 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 ZBTB21Q9ULJ3 1066 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
BEST3-211ENST00000552295 MYH6P13533 1939 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 PDE2AO00408 941 aaPredicted RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 ZBTB43O43298 467 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 CTNND1O60716 968 aaKnown RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 DDAH1O94760 285 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 TTLL1O95922 423 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 TOP1P11387 765 aaKnown RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 ACPPP15309 386 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 RXRAP19793 462 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 CCT2P78371 535 aaKnown RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 TROAPQ12815 778 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 MICU3Q86XE3 530 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 SIAH1Q8IUQ4 282 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 TTC16Q8NEE8 873 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 KAT14Q9H8E8 782 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 NCOA5Q9HCD5 579 aaKnown RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 CABP5Q9NP86 173 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 DZANK1Q9NVP4 752 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 NAP1L2Q9ULW6 460 aaPredicted RBP9.37□□□□□ -0.91
BEST3-211ENST00000552295 FZD1Q9UP38 647 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
BEST3-211ENST00000552295 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 WDR64B1ANS9 1081 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 ASNSP08243 561 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 CALM1P0DP23 149 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 CALM2P0DP24 149 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 CALM3P0DP25 149 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 EEF2P13639 858 aaKnown RBP9.36□□□□□ -0.91
BEST3-211ENST00000552295 NF2P35240 595 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 METAP2P50579 478 aaKnown RBP eCLIP9.36□□□□□ -0.91
BEST3-211ENST00000552295 ICA1Q05084 483 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 RAB3GAP1Q15042 981 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
BEST3-211ENST00000552295 SYNE3Q6ZMZ3 975 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 SCYL3Q8IZE3 742 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
BEST3-211ENST00000552295 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.36□□□□□ -0.91
BEST3-211ENST00000552295 EDEM1Q92611 657 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 MKL1Q969V6 931 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 INTS4Q96HW7 963 aaKnown RBP9.36□□□□□ -0.91
BEST3-211ENST00000552295 WRNIP1Q96S55 665 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 PTPRFP10586 1907 aa9.36□□□□□ -0.91
BEST3-211ENST00000552295 A0A1W2PRG0 241 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 TRAF5O00463 557 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 DTNBO60941 627 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 CTDNEP1O95476 244 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
BEST3-211ENST00000552295 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 FMR1Q06787 632 aaKnown RBP eCLIP9.35□□□□□ -0.91
BEST3-211ENST00000552295 C19orf57Q0VDD7 668 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 PRKG1Q13976 671 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 GRM4Q14833 912 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 MAP3K11Q16584 847 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
BEST3-211ENST00000552295 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 FANCBQ8NB91 859 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 GIMAP7Q8NHV1 300 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
BEST3-211ENST00000552295 PMEPA1Q969W9 287 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
BEST3-211ENST00000552295 SYNPO2Q9UMS6 1093 aa9.35□□□□□ -0.91
BEST3-211ENST00000552295 SOX13Q9UN79 622 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms