RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 TNFRSF18Q9Y5U5 241 aa5.82□□□□□ -1.48
USP44-207ENST00000552237 ZNF839A8K0R7 811 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 RAMP2O60895 175 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 LTFP02788 710 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 HHEXQ03014 270 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 C6orf15Q6UXA7 325 aaPredicted RBP5.81□□□□□ -1.48
USP44-207ENST00000552237 LARP4BQ92615 738 aaKnown RBP5.81□□□□□ -1.48
USP44-207ENST00000552237 TGIF2Q9GZN2 237 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 ACBD3Q9H3P7 528 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 CCSER2Q9H7U1 834 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 TLR9Q9NR96 1032 aa5.81□□□□□ -1.48
USP44-207ENST00000552237 AURKAIP1Q9NWT8 199 aaPredicted RBP5.81□□□□□ -1.48
USP44-207ENST00000552237 PUF60Q9UHX1 559 aaKnown RBP5.81□□□□□ -1.48
USP44-207ENST00000552237 GNAT1P11488 350 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 SPIRE1Q08AE8 756 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 NOLC1Q14978 699 aaKnown RBP eCLIP5.8□□□□□ -1.48
USP44-207ENST00000552237 LARP1BQ659C4 914 aaKnown RBP5.8□□□□□ -1.48
USP44-207ENST00000552237 DENND5AQ6IQ26 1287 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 DPP8Q6V1X1 898 aaPredicted RBP5.8□□□□□ -1.48
USP44-207ENST00000552237 OTOP3Q7RTS5 596 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.8□□□□□ -1.48
USP44-207ENST00000552237 CLIP3Q96DZ5 547 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 SCYL1Q96KG9 808 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 STRIP2Q9ULQ0 834 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 DMRT1Q9Y5R6 373 aa5.8□□□□□ -1.48
USP44-207ENST00000552237 SUSD5O60279 629 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 IL18BPO95998 194 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 MSX2P35548 267 aaPredicted RBP5.79□□□□□ -1.48
USP44-207ENST00000552237 FNDC7Q5VTL7 733 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 UHMK1Q8TAS1 419 aaKnown RBP5.79□□□□□ -1.48
USP44-207ENST00000552237 KCTD13Q8WZ19 329 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 AGAP2Q99490 1192 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 GPR27Q9NS67 375 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 PPARGC1AQ9UBK2 798 aaKnown RBP5.79□□□□□ -1.48
USP44-207ENST00000552237 INPP5FQ9Y2H2 1132 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 NPFFR2Q9Y5X5 522 aa5.79□□□□□ -1.48
USP44-207ENST00000552237 AGRPO00253 132 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 COL6A2P12110 1019 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 GRK2P25098 689 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 GRK3P35626 688 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 TOP3AQ13472 1001 aaPredicted RBP5.78□□□□□ -1.48
USP44-207ENST00000552237 WDR72Q3MJ13 1102 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 SLC35F1Q5T1Q4 408 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 SGMS1Q86VZ5 419 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 SEC16BQ96JE7 1060 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 KCNJ15Q99712 375 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 PRRX2Q99811 253 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 CDIP1Q9H305 208 aa5.78□□□□□ -1.48
USP44-207ENST00000552237 ARHGAP6O43182 974 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 HMGCRP04035 888 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 ETV4P43268 484 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 GJA8P48165 433 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 FOXL1Q12952 345 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 USP53Q70EK8 1073 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 C1orf159Q96HA4 380 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 PHF20Q9BVI0 1012 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 SLC39A2Q9NP94 309 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 PARPBPQ9NWS1 579 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 ACTR10Q9NZ32 417 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 DSEQ9UL01 958 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 GIT1Q9Y2X7 761 aa5.77□□□□□ -1.49
USP44-207ENST00000552237 B2RBV5 119 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 MSCO60682 206 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 DDAH1O94760 285 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 MAP4K2Q12851 820 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 CRHR2Q13324 411 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 ZNF627Q7L945 461 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 MICAL1Q8TDZ2 1067 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 VOPP1Q96AW1 172 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 TTPALQ9BTX7 342 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 CAPN10Q9HC96 672 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 MSL2Q9HCI7 577 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 PLA2G3Q9NZ20 509 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 ARHGAP28Q9P2N2 729 aa5.76□□□□□ -1.49
USP44-207ENST00000552237 CAPN14A8MX76 684 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 MATN2O00339 956 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 CYP27B1O15528 508 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 BMP5P22003 454 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 KCNQ1P51787 676 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 DUSP8Q13202 625 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 NFYCQ13952 458 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 KIZQ2M2Z5 673 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 KCTD1Q719H9 257 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 KIAA1683Q9H0B3 1180 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 TELO2Q9Y4R8 837 aa5.75□□□□□ -1.49
USP44-207ENST00000552237 NKRFO15226 690 aaKnown RBP eCLIP5.74□□□□□ -1.49
USP44-207ENST00000552237 FSTL1Q12841 308 aa5.74□□□□□ -1.49
USP44-207ENST00000552237 GRM7Q14831 915 aa5.74□□□□□ -1.49
USP44-207ENST00000552237 SCUBE1Q8IWY4 988 aa5.74□□□□□ -1.49
USP44-207ENST00000552237 THEMISQ8N1K5 641 aaPredicted RBP5.74□□□□□ -1.49
USP44-207ENST00000552237 D2HGDHQ8N465 521 aa5.74□□□□□ -1.49
USP44-207ENST00000552237 NAF1Q96HR8 494 aaKnown RBP5.74□□□□□ -1.49
USP44-207ENST00000552237 IER2Q9BTL4 223 aa5.74□□□□□ -1.49
USP44-207ENST00000552237 ZNF703Q9H7S9 590 aaPredicted RBP5.74□□□□□ -1.49
USP44-207ENST00000552237 SLC2A4RGQ9NR83 387 aa5.74□□□□□ -1.49
USP44-207ENST00000552237 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 SMAD7O15105 426 aaKnown RBP5.73□□□□□ -1.49
USP44-207ENST00000552237 ADCY8P40145 1251 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 HNRNPA0Q13151 305 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms