RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 LRRC8DQ7L1W4 858 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 RPAINQ86UA6 219 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 FAM160B2Q86V87 743 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 RNF135Q8IUD6 432 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 ITPRIPQ8IWB1 547 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 RPAP2Q8IXW5 612 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 BANK1Q8NDB2 785 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 GMCL1P1Q8NEA9 526 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 RHPN1Q8TCX5 695 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 STAG1Q8WVM7 1258 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 PBXIP1Q96AQ6 731 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 PABPC5Q96DU9 382 aaKnown RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 CTAGE1Q96RT6 745 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.37□□□□□ -1.393e-8■■□□□ 14.5
HOXB3-213ENST00000552000 PUS7LQ9H0K6 701 aaKnown RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 MTMR4Q9NYA4 1195 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 ARPP21Q9UBL0 812 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 ADD3Q9UEY8 706 aaKnown RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 CTNNA3Q9UI47 895 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 CCPG1Q9ULG6 757 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 PLXNA3P51805 1871 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 KMT2EQ8IZD2 1858 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 CEP295Q9C0D2 2601 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 TMEM221A6NGB7 291 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 A6NJR5 290 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 GSG1L2A8MUP6 293 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 M0R296 226 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 KPNA6O60684 536 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 EFCAB14O75071 495 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 CKBP12277 381 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 LTBRP36941 435 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 SLC1A4P43007 532 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 EPC2Q52LR7 807 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 SBK1Q52WX2 424 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 RASGRP2Q7LDG7 609 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 SUGP1Q8IWZ8 645 aaKnown RBP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 MYOCDQ8IZQ8 938 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 ZNF444Q8N0Y2 327 aaPredicted RBP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 CLASRPQ8N2M8 674 aaKnown RBP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 RNF217Q8TC41 542 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 SCFD2Q8WU76 684 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 EDAQ92838 391 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 STRBPQ96SI9 672 aaKnown RBP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 NSUN3Q9H649 340 aaKnown RBP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 SLC24A3Q9HC58 644 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 CDV3Q9UKY7 258 aaKnown RBP6.36□□□□□ -1.39
HOXB3-213ENST00000552000 PRR12Q9ULL5 1215 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 MTMR7Q9Y216 660 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 INSL6Q9Y581 213 aa6.36□□□□□ -1.39
HOXB3-213ENST00000552000 BAZ2BQ9UIF8 2168 aaKnown RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 TTC3P53804 2025 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 KIAA1217Q5T5P2 1943 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 H3BNC9 293 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 NFIBO00712 420 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 NKRFO15226 690 aaKnown RBP eCLIP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 MBTPS2O43462 519 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 PLA2G6O60733 806 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 LGR5O75473 907 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 PARNO95453 639 aaKnown RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 AMHP03971 560 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 PROCP04070 461 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 TSPY3P0CV98 308 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 TSPY8P0CW00 308 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 TXNP10599 105 aaKnown RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 RLBP1P12271 317 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 CALML3P27482 149 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 HTRA4P83105 476 aaPredicted RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 PDE4BQ07343 736 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 DLX2Q07687 328 aaPredicted RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 PDE4DQ08499 809 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 RBL2Q08999 1139 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 MBTPS1Q14703 1052 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 COL19A1Q14993 1142 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 SMAD2Q15796 467 aaKnown RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 HSP90AB4PQ58FF6 505 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 FOXR1Q6PIV2 292 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 SLC30A10Q6XR72 485 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 BMP8AQ7Z5Y6 402 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 FTSJ3Q8IY81 847 aaKnown RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 TMEM192Q8IY95 271 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 AFG1LQ8WV93 481 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 KAT2BQ92831 832 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 GPKOWQ92917 476 aaPredicted RBP eCLIP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 WNT8BQ93098 351 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 KIF1BPQ96EK5 621 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 GMCL1Q96IK5 515 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 YME1L1Q96TA2 773 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 POP1Q99575 1024 aaKnown RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 PRRX2Q99811 253 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 HAUS7Q99871 368 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 EPB41L4AQ9HCS5 686 aaPredicted RBP6.35□□□□□ -1.39
HOXB3-213ENST00000552000 HDAC6Q9UBN7 1215 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 SYNPO2Q9UMS6 1093 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 CACNA1IQ9P0X4 2223 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 CFAP47Q6ZTR5 3102 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 USP24Q9UPU5 2620 aa6.35□□□□□ -1.39
HOXB3-213ENST00000552000 MYH6P13533 1939 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms