RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
TMEM106C-216ENST00000551305 ZNF689Q96CS4 500 aaPredicted RBP17.01■□□□□ 0.31
TMEM106C-216ENST00000551305 PCYT2Q99447 389 aa17.01■□□□□ 0.31
TMEM106C-216ENST00000551305 LZTS2Q9BRK4 669 aa17.01■□□□□ 0.31
TMEM106C-216ENST00000551305 TUBE1Q9UJT0 475 aa17.01■□□□□ 0.31
TMEM106C-216ENST00000551305 ADGRA3Q8IWK6 1321 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 CCDC69A6NI79 296 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 RB1P06400 928 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 CD52P31358 61 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 GNAQP50148 359 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 ZP2Q05996 745 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 MTMR1Q13613 665 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 BTG3Q14201 252 aaPredicted RBP17■□□□□ 0.31
TMEM106C-216ENST00000551305 RSPH3Q86UC2 560 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 RTN4RL1Q86UN2 441 aaPredicted RBP17■□□□□ 0.31
TMEM106C-216ENST00000551305 LINC01599Q8WXQ3 324 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 FAM49AQ9H0Q0 323 aaPredicted RBP17■□□□□ 0.31
TMEM106C-216ENST00000551305 SMARCAD1Q9H4L7 1026 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 IGFLR1Q9H665 355 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 ALG13Q9NP73 1137 aaKnown RBP17■□□□□ 0.31
TMEM106C-216ENST00000551305 JADE2Q9NQC1 790 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 PCDHA6Q9UN73 950 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 PCDHA8Q9Y5H6 950 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 KAT6AQ92794 2004 aa17■□□□□ 0.31
TMEM106C-216ENST00000551305 MYO7AQ13402 2215 aa16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 DGKIO75912 1065 aa16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 INSRRP14616 1297 aa16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 TMEM62Q0P6H9 643 aa16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 CTC1Q2NKJ3 1217 aa16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 CLP1Q92989 425 aaKnown RBP16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 CDHR1Q96JP9 859 aa16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 C11orf84Q9BUA3 381 aaPredicted RBP16.99■□□□□ 0.31
TMEM106C-216ENST00000551305 RALGAPA2Q2PPJ7 1873 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 C19orf67A6NJJ6 358 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 LINC01565O15544 149 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 DCXO43602 365 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 MCM5P33992 734 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 MRPS6P82932 125 aaKnown RBP16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 CAMK1Q14012 370 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 TSHZ1Q6ZSZ6 1077 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 CYP2W1Q8TAV3 490 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 TRAPPC12Q8WVT3 735 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 LMAN2LQ9H0V9 348 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 RWDD3Q9Y3V2 267 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 MRPL42Q9Y6G3 142 aaKnown RBP16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 ATG2AQ2TAZ0 1938 aa16.98■□□□□ 0.31
TMEM106C-216ENST00000551305 SPDYE3A6NKU9 549 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 DNAJB1P25685 340 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 CSPP1Q1MSJ5 1256 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 ADHFE1Q8IWW8 467 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 TMEM87BQ96K49 555 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 LSG1Q9H089 658 aaKnown RBP16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 JPH1Q9HDC5 661 aaPredicted RBP16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 PRKAG3Q9UGI9 489 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 PLAGL2Q9UPG8 496 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
TMEM106C-216ENST00000551305 SLC27A2O14975 620 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 MBTPS2O43462 519 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 NCK2O43639 380 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 TBX10O75333 385 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 IRS1P35568 1242 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 PAN2Q504Q3 1202 aaKnown RBP16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 HEATR3Q7Z4Q2 680 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 ALYREFQ86V81 257 aaKnown RBP16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 FANCBQ8NB91 859 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 SLC9A2Q9UBY0 812 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 TRPC6Q9Y210 931 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 SLC12A7Q9Y666 1083 aa16.96■□□□□ 0.31
TMEM106C-216ENST00000551305 TTC3P53804 2025 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 RRN3P2A6NIE6 340 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 MAFGO15525 162 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 MMP1P03956 469 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 CALM1P0DP23 149 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 CALM2P0DP24 149 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 CALM3P0DP25 149 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 ARP10275 920 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 IBSPP21815 317 aaPredicted RBP16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 LIFRP42702 1097 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 GATMP50440 423 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 PLCB4Q15147 1175 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 SMAD2Q15796 467 aaKnown RBP16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 IER5Q5VY09 327 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 CRIPAKQ8N1N5 446 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 SPPL3Q8TCT6 385 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 MXRA8Q9BRK3 442 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 PLVAPQ9BX97 442 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 KCNH7Q9NS40 1196 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 PADI3Q9ULW8 664 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 TRPV2Q9Y5S1 764 aa16.95■□□□□ 0.3
TMEM106C-216ENST00000551305 ITGB1P05556 798 aa16.94■□□□□ 0.3
TMEM106C-216ENST00000551305 ACTR2P61160 394 aa16.94■□□□□ 0.3
TMEM106C-216ENST00000551305 ADAM15Q13444 863 aa16.94■□□□□ 0.3
TMEM106C-216ENST00000551305 TMEM266Q2M3C6 531 aa16.94■□□□□ 0.3
TMEM106C-216ENST00000551305 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms