RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 TXNRD3Q86VQ6 643 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 LRRC57Q8N9N7 239 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 CEP95Q96GE4 821 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 NAP1L4Q99733 375 aaKnown RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 JPH2Q9BR39 696 aaPredicted RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 CXorf56Q9H5V9 222 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 BCCIPQ9P287 314 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 TMCO5BA8MYB1 307 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 GCFC2P16383 781 aaKnown RBP16.43■□□□□ 0.22
PDE1B-207ENST00000550620 TNNI2P48788 182 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 ECM1Q16610 540 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 ASPRV1Q53RT3 343 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 KCTD10Q9H3F6 313 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 SLC40A1Q9NP59 571 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 EMILIN3Q9NT22 766 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 SWAP70Q9UH65 585 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 C5orf60A6NFR6 353 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 HERC4Q5GLZ8 1057 aaPredicted RBP16.43■□□□□ 0.22
PDE1B-207ENST00000550620 SPDYCQ5MJ68 293 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 ALKBH5Q6P6C2 394 aaKnown RBP16.43■□□□□ 0.22
PDE1B-207ENST00000550620 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
PDE1B-207ENST00000550620 PEX26Q7Z412 305 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 CACNA2D3Q8IZS8 1091 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 RASGEF1CQ8N431 466 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 OR2W6PQ8NHA6 318 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 COA7Q96BR5 231 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 CNOT10Q9H9A5 744 aaKnown RBP16.43■□□□□ 0.22
PDE1B-207ENST00000550620 FAM114A2Q9NRY5 505 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 TBC1D7Q9P0N9 293 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 NAGPAQ9UK23 515 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 KAT6BQ8WYB5 2073 aa16.43■□□□□ 0.22
PDE1B-207ENST00000550620 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 A0A0A6YYK5 440 aaPredicted RBP16.42■□□□□ 0.22
PDE1B-207ENST00000550620 PDHBP11177 359 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 PRKCIP41743 596 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 NOVP48745 357 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 FRMD5Q7Z6J6 570 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 METTL13Q8N6R0 699 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 SCFD1Q8WVM8 642 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 ZKSCAN4Q969J2 545 aaPredicted RBP16.42■□□□□ 0.22
PDE1B-207ENST00000550620 AP1M1Q9BXS5 423 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 SUCLA2Q9P2R7 463 aaPredicted RBP16.42■□□□□ 0.22
PDE1B-207ENST00000550620 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
PDE1B-207ENST00000550620 EDIL3O43854 480 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 PLA2G4BP0C869 781 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 UCHL3P15374 230 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 EIF3BP55884 814 aaKnown RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 GKAP1Q5VSY0 366 aaPredicted RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 DDX42Q86XP3 938 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 SEC16BQ96JE7 1060 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 DDX47Q9H0S4 455 aaKnown RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 NEUROG2Q9H2A3 272 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 INTUQ9ULD6 942 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 NOVA2Q9UNW9 492 aaKnown RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 UTP11Q9Y3A2 253 aaKnown RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 KRT18P05783 430 aaKnown RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 PLCG2P16885 1265 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 NR2F2P24468 414 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 NPEPPSP55786 919 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 NEDD9Q14511 834 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 TMC3Q7Z5M5 1100 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 GPBP1Q86WP2 473 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 GIMAP7Q8NHV1 300 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 HAS1Q92839 578 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 FGFBP2Q9BYJ0 223 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 CD248Q9HCU0 757 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
PDE1B-207ENST00000550620 TAF1P21675 1872 aa16.41■□□□□ 0.22
PDE1B-207ENST00000550620 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
PDE1B-207ENST00000550620 PITPNM2Q9BZ72 1349 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 DAPK3O43293 454 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 H2AFZP0C0S5 128 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 BTDP43251 543 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 SNCBQ16143 134 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 KRT71Q3SY84 523 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 ANKRD20A8PQ5CZ79 823 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 H2AFVQ71UI9 128 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 SLFN11Q7Z7L1 901 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
PDE1B-207ENST00000550620 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 SEC14L1Q92503 715 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 CUL5Q93034 780 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 PSMD1Q99460 953 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms