RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 EEPD1Q7L9B9 569 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 UHMK1Q8TAS1 419 aaKnown RBP4.33□□□□□ -1.72
CCNT1-203ENST00000550457 KATNBL1Q9H079 304 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 CAPN10Q9HC96 672 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 ARHGAP20Q9P2F6 1191 aa4.33□□□□□ -1.72
CCNT1-203ENST00000550457 PRXQ9BXM0 1461 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 RAPGEF2Q9Y4G8 1499 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ZBED9Q6R2W3 1325 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ZNF839A8K0R7 811 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 NPIPB8E9PQR5 432 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ACOT7O00154 380 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 PLSCR1O15162 318 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 GRK2P25098 689 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 GRK3P35626 688 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 FOXE3Q13461 319 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 NTRK3Q16288 839 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 RSPO2Q6UXX9 243 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-203ENST00000550457 LBX2Q6XYB7 198 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 RNF207Q6ZRF8 634 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 TAX1BP1Q86VP1 789 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 CELF2-AS1Q8N7Q2 184 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 NEIL1Q96FI4 390 aaPredicted RBP4.32□□□□□ -1.72
CCNT1-203ENST00000550457 KCNJ15Q99712 375 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ZNF341Q9BYN7 854 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 EPN3Q9H201 632 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ZNF408Q9H9D4 720 aa4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ZFR2Q9UPR6 939 aaKnown RBP4.32□□□□□ -1.72
CCNT1-203ENST00000550457 ARAP1Q96P48 1450 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 WASHC2CQ9Y4E1 1318 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 ENO2P09104 434 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-203ENST00000550457 PRKD1Q15139 912 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-203ENST00000550457 AGBL4Q5VU57 503 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-203ENST00000550457 REXO1L1PQ8IX06 675 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 FUKQ8N0W3 1084 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 GIMAP8Q8ND71 665 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-203ENST00000550457 OSBP2Q969R2 916 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 ZNF503Q96F45 646 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 CCDC136Q96JN2 1154 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 ADOQ96SZ5 270 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 TACO1Q9BSH4 297 aaKnown RBP4.31□□□□□ -1.72
CCNT1-203ENST00000550457 SYNJ1O43426 1573 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 PEG3Q9GZU2 1588 aa4.31□□□□□ -1.72
CCNT1-203ENST00000550457 FHAD1B1AJZ9 1412 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 BLACEA4D250 179 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 H0Y858 1186 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 AGRPO00253 132 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 FGRP09769 529 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 GNAT1P11488 350 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 EPHA5P54756 1037 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 USP10Q14694 798 aaKnown RBP4.3□□□□□ -1.72
CCNT1-203ENST00000550457 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 HS1BP3Q53T59 392 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 MIIPQ5JXC2 388 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 Q6ZSN1 163 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 SH3RF2Q8TEC5 729 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 DCAF4Q8WV16 495 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 EXTL1Q92935 676 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 CD244Q9BZW8 370 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 SLC39A2Q9NP94 309 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 ARHGEF4Q9NR80 690 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 ST7Q9NRC1 585 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 DSEQ9UL01 958 aa4.3□□□□□ -1.72
CCNT1-203ENST00000550457 WDR97A6NE52 1622 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 RNF123Q5XPI4 1314 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 TCRBV5S4A2TA0A5A2 114 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 PRODHO43272 600 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 DGCR2P98153 550 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 SPIRE1Q08AE8 756 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 FHL2Q14192 279 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 NOLC1Q14978 699 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCNT1-203ENST00000550457 RNF151Q2KHN1 245 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 KIZQ2M2Z5 673 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 NRN1LQ496H8 165 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 USP39Q53GS9 565 aaKnown RBP4.29□□□□□ -1.72
CCNT1-203ENST00000550457 KCTD1Q719H9 257 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 VPS37DQ86XT2 251 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 IFNL2Q8IZJ0 200 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 HNRNPLLQ8WVV9 542 aaKnown RBP4.29□□□□□ -1.72
CCNT1-203ENST00000550457 EDAQ92838 391 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCNT1-203ENST00000550457 IPPKQ9H8X2 491 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 ASXL2Q76L83 1435 aa4.29□□□□□ -1.72
CCNT1-203ENST00000550457 SMG6Q86US8 1419 aaKnown RBP4.29□□□□□ -1.72
CCNT1-203ENST00000550457 TONSLQ96HA7 1378 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 ESYT3A0FGR9 886 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 MATN2O00339 956 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 TCERG1O14776 1098 aaKnown RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 NARSO43776 548 aaKnown RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 RAD17O75943 681 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 SOD2P04179 222 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 PABPC1P11940 636 aaKnown RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 COMTP21964 271 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 GPR85P60893 370 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 DUSP8Q13202 625 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 TOP3AQ13472 1001 aaPredicted RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 HSP90AA2PQ14568 343 aaPredicted RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 YOD1Q5VVQ6 348 aaPredicted RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 MCF2L2Q86YR7 1114 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms