RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CAPN11Q9UMQ6 739 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 RPTORQ8N122 1335 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 PITPNM2Q9BZ72 1349 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 TESPA1A2RU30 521 aaPredicted RBP23.18■■□□□ 1.3
PRDM4-205ENST00000550376 DHX15O43143 795 aaKnown RBP23.18■■□□□ 1.3
PRDM4-205ENST00000550376 ADAM9Q13443 819 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 MTMR1Q13613 665 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 TMEM132BQ14DG7 1078 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 PGM5Q15124 567 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 FKBP15Q5T1M5 1219 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 CRACR2AQ9BSW2 395 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 CCP110O43303 1012 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 GCNT3O95395 438 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 ARID3AQ99856 593 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 NAA15Q9BXJ9 866 aaKnown RBP23.18■■□□□ 1.3
PRDM4-205ENST00000550376 TTYH3Q9C0H2 523 aa23.18■■□□□ 1.3
PRDM4-205ENST00000550376 SETQ01105 290 aaPredicted RBP23.17■■□□□ 1.3
PRDM4-205ENST00000550376 ARHGEF16Q5VV41 709 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 MOB2Q70IA6 237 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 MYCT1Q8N699 235 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 CCDC51Q96ER9 411 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 TUFT1Q9NNX1 390 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 COL4A3BPQ9Y5P4 624 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 CLIC2O15247 247 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 TBCAO75347 108 aaKnown RBP23.17■■□□□ 1.3
PRDM4-205ENST00000550376 YBX3P16989 372 aaKnown RBP eCLIP23.17■■□□□ 1.3
PRDM4-205ENST00000550376 TRIM14Q14142 442 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 MAN2A1Q16706 1144 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 CYP26C1Q6V0L0 522 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.17■■□□□ 1.3
PRDM4-205ENST00000550376 C1orf186Q6ZWK4 172 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 TMTC1Q8IUR5 882 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 AGO4Q9HCK5 861 aaKnown RBP23.17■■□□□ 1.3
PRDM4-205ENST00000550376 TELO2Q9Y4R8 837 aa23.17■■□□□ 1.3
PRDM4-205ENST00000550376 VGLL4Q14135 290 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 B3GNT9Q6UX72 402 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 MIER3Q7Z3K6 550 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 GINM1Q9NU53 330 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 URI1O94763 535 aaPredicted RBP23.16■■□□□ 1.3
PRDM4-205ENST00000550376 COG2Q14746 738 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 PCNX4Q63HM2 1172 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 PDCD2LQ9BRP1 358 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 PXMP2Q9NR77 195 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 TRIM10Q9UDY6 481 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 ZNF214Q9UL59 606 aaPredicted RBP23.16■■□□□ 1.3
PRDM4-205ENST00000550376 AFG3L2Q9Y4W6 797 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 UBIAD1Q9Y5Z9 338 aa23.16■■□□□ 1.3
PRDM4-205ENST00000550376 KIF2AO00139 706 aaPredicted RBP23.15■■□□□ 1.3
PRDM4-205ENST00000550376 NR2F2P24468 414 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 DSG3P32926 999 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 EPHA7Q15375 998 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 REPS2Q8NFH8 660 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 DNAJC7Q99615 494 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 SIK3Q9Y2K2 1263 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 CTIFO43310 598 aaKnown RBP23.15■■□□□ 1.3
PRDM4-205ENST00000550376 SLC26A4O43511 780 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 FAM13AO94988 1023 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 FGFR1OPO95684 399 aaKnown RBP23.15■■□□□ 1.3
PRDM4-205ENST00000550376 PLEKP08567 350 aaPredicted RBP23.15■■□□□ 1.3
PRDM4-205ENST00000550376 TREML2Q5T2D2 321 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.15■■□□□ 1.3
PRDM4-205ENST00000550376 ERGIC2Q96RQ1 377 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 JADE2Q9NQC1 790 aa23.15■■□□□ 1.3
PRDM4-205ENST00000550376 FECHP22830 423 aa23.14■■□□□ 1.3
PRDM4-205ENST00000550376 KNOP1Q1ED39 458 aaKnown RBP23.14■■□□□ 1.3
PRDM4-205ENST00000550376 SUPT20HL1Q3ZLR7 823 aa23.14■■□□□ 1.3
PRDM4-205ENST00000550376 SYT17Q9BSW7 474 aa23.14■■□□□ 1.3
PRDM4-205ENST00000550376 REXO2Q9Y3B8 237 aaKnown RBP23.14■■□□□ 1.3
PRDM4-205ENST00000550376 SP4Q02446 784 aa23.14■■□□□ 1.29
PRDM4-205ENST00000550376 UTP14CQ5TAP6 766 aaKnown RBP23.14■■□□□ 1.29
PRDM4-205ENST00000550376 CATSPERGQ6ZRH7 1159 aa23.14■■□□□ 1.29
PRDM4-205ENST00000550376 KRT26Q7Z3Y9 468 aa23.14■■□□□ 1.29
PRDM4-205ENST00000550376 NACC1Q96RE7 527 aa23.14■■□□□ 1.29
PRDM4-205ENST00000550376 RIT2Q99578 217 aa23.14■■□□□ 1.29
PRDM4-205ENST00000550376 TMOD4Q9NZQ9 345 aa23.14■■□□□ 1.29
PRDM4-205ENST00000550376 KCNMA1Q12791 1236 aa23.13■■□□□ 1.29
PRDM4-205ENST00000550376 UGCGQ16739 394 aa23.13■■□□□ 1.29
PRDM4-205ENST00000550376 EPM2AIP1Q7L775 607 aaPredicted RBP23.13■■□□□ 1.29
PRDM4-205ENST00000550376 STK24Q9Y6E0 443 aa23.13■■□□□ 1.29
PRDM4-205ENST00000550376 EPN1Q9Y6I3 576 aaPredicted RBP23.13■■□□□ 1.29
PRDM4-205ENST00000550376 CASP4P49662 377 aa23.13■■□□□ 1.29
PRDM4-205ENST00000550376 TSR1Q2NL82 804 aaKnown RBP23.13■■□□□ 1.29
PRDM4-205ENST00000550376 SNCAIPQ9Y6H5 919 aa23.13■■□□□ 1.29
PRDM4-205ENST00000550376 NCBP1Q09161 790 aaKnown RBP23.12■■□□□ 1.29
PRDM4-205ENST00000550376 DOCK1Q14185 1865 aa23.12■■□□□ 1.29
PRDM4-205ENST00000550376 NDUFA10O95299 355 aa23.12■■□□□ 1.29
PRDM4-205ENST00000550376 C9orf131Q5VYM1 1079 aa23.12■■□□□ 1.29
PRDM4-205ENST00000550376 NLRC4Q9NPP4 1024 aa23.12■■□□□ 1.29
PRDM4-205ENST00000550376 C19orf81C9J6K1 198 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 CCNE2O96020 404 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 CASQ1P31415 396 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 CYP27A1Q02318 531 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 CLMNQ96JQ2 1002 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.11■■□□□ 1.29
PRDM4-205ENST00000550376 ARHGEF35A5YM69 484 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 SPDYE16A6NNV3 312 aaPredicted RBP23.11■■□□□ 1.29
PRDM4-205ENST00000550376 NR3C2P08235 984 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 BCRP11274 1271 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 ZBED6P86452 979 aa23.11■■□□□ 1.29
PRDM4-205ENST00000550376 RRAGAQ7L523 313 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms