RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 MUC6Q6W4X9 2439 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 WDFY4Q6ZS81 3184 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 CSPG5O95196 566 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 RB1P06400 928 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 INSRRP14616 1297 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 CD52P31358 61 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 IRS1P35568 1242 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 CLUL1Q15846 466 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 CYP2W1Q8TAV3 490 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 TRAPPC12Q8WVT3 735 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 CUL5Q93034 780 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 PSTPIP2Q9H939 334 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 JADE2Q9NQC1 790 aa13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
SMARCD1-208ENST00000550280 TTC3P53804 2025 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 MBTPS2O43462 519 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 DCXO43602 365 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 MMP1P03956 469 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 KIF5BP33176 963 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 GATMP50440 423 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 IGBP1P78318 339 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 MTMR1Q13613 665 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 TSHZ1Q6ZSZ6 1077 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 ADHFE1Q8IWW8 467 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 PGBD1Q96JS3 809 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 ALG13Q9NP73 1137 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 ERAP1Q9NZ08 941 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 PCDHA6Q9UN73 950 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 PCDHA8Q9Y5H6 950 aa13.29□□□□□ -0.28
SMARCD1-208ENST00000550280 SLC27A2O14975 620 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 ITGB1P05556 798 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 TMEM62Q0P6H9 643 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 PLCB4Q15147 1175 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 GIMAP8Q8ND71 665 aaPredicted RBP13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 GLG1Q92896 1179 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 MSLNLQ96KJ4 702 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 MTA3Q9BTC8 594 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 FAM49AQ9H0Q0 323 aaPredicted RBP13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 LMAN2LQ9H0V9 348 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 SMARCAD1Q9H4L7 1026 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 PRKAG3Q9UGI9 489 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 PCDHGC5Q9Y5F6 944 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 TRIOO75962 3097 aa13.28□□□□□ -0.28
SMARCD1-208ENST00000550280 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 MGEA5O60502 916 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 ARP10275 920 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 ALADP13716 330 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 LIFRP42702 1097 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 FUT2Q10981 343 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 ADAM15Q13444 863 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 BTG3Q14201 252 aaPredicted RBP13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 NECTIN1Q15223 517 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 SPPL3Q8TCT6 385 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 CDHR1Q96JP9 859 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 CLEC1BQ9P126 229 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 PADI3Q9ULW8 664 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 CNTNAP5Q8WYK1 1306 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 KIAA1671Q9BY89 1806 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 PIEZO1Q92508 2521 aa13.27□□□□□ -0.29
SMARCD1-208ENST00000550280 GLP2RO95838 553 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 CCNE2O96020 404 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 MCM5P33992 734 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 GNAQP50148 359 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 ACTR2P61160 394 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 PAN2Q504Q3 1202 aaKnown RBP13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 HFE2Q6ZVN8 426 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 ALYREFQ86V81 257 aaKnown RBP13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 FANCBQ8NB91 859 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 TMEM40Q8WWA1 233 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 P2RX5Q93086 422 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 TMEM87BQ96K49 555 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 IGFLR1Q9H665 355 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 JPH1Q9HDC5 661 aaPredicted RBP13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 HCSTQ9UBK5 93 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 MUTYHQ9UIF7 546 aa13.26□□□□□ -0.29
SMARCD1-208ENST00000550280 IGSF9BQ9UPX0 1349 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms