RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 BACH1O14867 736 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 CHMP2AO43633 222 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 LGR5O75473 907 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 GJB1P08034 283 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 C6orf222P0C671 652 aaPredicted RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 CCL5P13501 91 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 CCND3P30281 292 aaPredicted RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 TCF7P36402 384 aaPredicted RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 PSMC5P62195 406 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 SPIRE1Q08AE8 756 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 FSCN1Q16658 493 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 OTUD6AQ7L8S5 288 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 CABP7Q86V35 215 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 TRPV1Q8NER1 839 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 AFAP1L1Q8TED9 768 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 MRPS27Q92552 414 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 GPR20Q99678 358 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 EIF2AK1Q9BQI3 630 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 FTOQ9C0B1 505 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 LRRC27Q9C0I9 530 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 RNF208Q9H0X6 261 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 ERAP1Q9NZ08 941 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 PKD2L1Q9P0L9 805 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 STK17AQ9UEE5 414 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 HOOK1Q9UJC3 728 aaKnown RBP10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 PCDHA7Q9UN72 937 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 HTTP42858 3142 aa10.95□□□□□ -0.66
SMARCD1-206ENST00000549274 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 IGKV6D-21A0A0A0MT36 114 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 LYPLA2O95372 231 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 MBD3O95983 291 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 RPLP2P05387 115 aaKnown RBP10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 MMP3P08254 477 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 CCT6AP40227 531 aaKnown RBP10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 STAT5BP51692 787 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 SP2Q02086 613 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 GNASQ5JWF2 1037 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 HYIQ5T013 277 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 RESP18Q5W5W9 173 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 KANK3Q6NY19 840 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 C4orf19Q8IY42 314 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 AFG1LQ8WV93 481 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 GLG1Q92896 1179 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 NACC1Q96RE7 527 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 JPH2Q9BR39 696 aaPredicted RBP10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 CSRNP2Q9H175 543 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 ZNF302Q9NR11 478 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
SMARCD1-206ENST00000549274 COL1A2P08123 1366 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 IGSF9BQ9UPX0 1349 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 POTEMA6NI47 508 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 DNM1LO00429 736 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 ADAMTS4O75173 837 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 GNAT1P11488 350 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 AMPD3Q01432 767 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 SP4Q02446 784 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 TRIM32Q13049 653 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 HSDL1Q3SXM5 330 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 XKR3Q5GH77 459 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 CKAP2LQ8IYA6 745 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 IQUBQ8NA54 791 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 KLHDC9Q8NEP7 349 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 LXNQ9BS40 222 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 MTG1Q9BT17 334 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 MCOLN1Q9GZU1 580 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 ANKEF1Q9NU02 776 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 OGDHLQ9ULD0 1010 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 DNM3Q9UQ16 869 aa10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 MAFBQ9Y5Q3 323 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 DDX49Q9Y6V7 483 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-206ENST00000549274 FAM237AA0A1B0GTK4 181 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 GSTTP1A0A1W2PQM5 241 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 RRN3P2A6NIE6 340 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 H3BRB1 525 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 HBP1O60381 514 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 CCNE2O96020 404 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 F2P00734 622 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 LGALS2P05162 132 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 MYL1P05976 194 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 SYKP43405 635 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 PTPN11Q06124 597 aaPredicted RBP10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 RRAGBQ5VZM2 374 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 CEP57L1Q8IYX8 460 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 FSIP1Q8NA03 581 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 SYMPKQ92797 1274 aaKnown RBP10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 COPS5Q92905 334 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 GLT1D1Q96MS3 346 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 HSD17B14Q9BPX1 270 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms