RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLKQ9H2G2 1235 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PXMP2Q9NR77 195 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 TMOD2Q9NZR1 351 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 CXXC1Q9P0U4 656 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 RWDD2AQ9UIY3 292 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 INTUQ9ULD6 942 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 SMCHD1A6NHR9 2005 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 EYA4O95677 639 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 EEF2P13639 858 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 VCAM1P19320 739 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 CYP3A5P20815 502 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 LRRC63Q05C16 580 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 COG2Q14746 738 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 TRIM71Q2Q1W2 868 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 IQSEC1Q6DN90 963 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 KRBA2Q6ZNG9 492 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 ARMC9Q7Z3E5 817 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 MRPL10Q7Z7H8 261 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 TRIM22Q8IYM9 498 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 GUF1Q8N442 669 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 FAM167AQ96KS9 214 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 ELAC1Q9H777 363 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 KAT14Q9H8E8 782 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 SPTLC3Q9NUV7 552 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 CYP39A1Q9NYL5 469 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PHF24Q9UPV7 400 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 MRPL42Q9Y6G3 142 aaKnown RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 ASAP2O43150 1006 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 GNA14O95837 355 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 CDH5P33151 784 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 KRT85P78386 507 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 TFAP4Q01664 338 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 NFIAQ12857 509 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 TRIM14Q14142 442 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 TAPT1Q6NXT6 567 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 CCDC129Q6ZRS4 1044 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 NEK8Q86SG6 692 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 MIGA1Q8NAN2 632 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 CXorf38Q8TB03 319 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 JDP2Q8WYK2 163 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 PNMA5Q96PV4 448 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 P2RX7Q99572 595 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 PHACTR1Q9C0D0 580 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 RMND1Q9NWS8 449 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 ASB14A6NK59 587 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 F5H6K3 240 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 FIBPO43427 364 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 NEMFO60524 1076 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 CXCL10P02778 98 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 APPP05067 770 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 SPATA31C1P0DKV0 1188 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 CD44P16070 742 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 IRX5P78411 483 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 KLRC3Q07444 240 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 RASIP1Q5U651 963 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 SHC4Q6S5L8 630 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 ALKAL1Q6UXT8 129 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 TRPM4Q8TD43 1214 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 ERGIC2Q96RQ1 377 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 KCTD10Q9H3F6 313 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 DHX33Q9H6R0 707 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 NOL7Q9UMY1 257 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 KIAA1024Q9UPX6 916 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 KLF18A0A0U1RQI7 1052 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 ZBTB42B2RXF5 422 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 EIF3JO75822 258 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 PIP4K2AP48426 406 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 AARSP49588 968 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 NLRP12P59046 1061 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 MAPK7Q13164 816 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 OS9Q13438 667 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 COL9A3Q14050 684 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 PGM5Q15124 567 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 PPP2R5AQ15172 486 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 UNC13DQ70J99 1090 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 TMC7Q7Z402 723 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 RALYLQ86SE5 291 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 CD302Q8IX05 232 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 GOLGA5Q8TBA6 731 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 GPT2Q8TD30 523 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 SYMPKQ92797 1274 aaKnown RBP5.51□□□□□ -1.53
SCAF11-212ENST00000549162 BLOC1S4Q9NUP1 217 aa5.51□□□□□ -1.53
SCAF11-212ENST00000549162 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 G3V3G9 751 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 DKK1O94907 266 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 CYBAP13498 195 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 VEGFAP15692 232 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 EIF4BP23588 611 aaKnown RBP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 PTPN7P35236 360 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 KCNJ4P48050 445 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 CDK7P50613 346 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 ADCY7P51828 1080 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 NONOQ15233 471 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCAF11-212ENST00000549162 TRAF7Q6Q0C0 670 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 C1orf186Q6ZWK4 172 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 VPS37DQ86XT2 251 aa5.5□□□□□ -1.53
SCAF11-212ENST00000549162 AVENQ9NQS1 362 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms