RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 SPATA31C1P0DKV0 1188 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 LBX1P52954 281 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 TRIM32Q13049 653 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 GRB10Q13322 594 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 SNW1Q13573 536 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 KLHL40Q2TBA0 621 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 TMEM119Q4V9L6 283 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 CATSPER3Q86XQ3 398 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 DYDC2Q96IM9 177 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 TIGD1Q96MW7 591 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 GPR20Q99678 358 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 STK17AQ9UEE5 414 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 ARID2Q68CP9 1835 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 CEP350Q5VT06 3117 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 GSTTP1A0A1W2PQM5 241 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 ADCY6O43306 1168 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 SORBS3O60504 671 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 NR1I2O75469 434 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 SLITRK3O94933 977 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 ZNF202O95125 648 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 LYPLA2O95372 231 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 INHAP05111 366 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 CNGA1P29973 690 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 STAT6P42226 847 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 QARSP47897 775 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 PSMC5P62195 406 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 SP4Q02446 784 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 PKN2Q16513 984 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 TMEM63BQ5T3F8 832 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 PDILTQ8N807 584 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 ATP6V0A1Q93050 837 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 MAGEF1Q9HAY2 307 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 DDX19AQ9NUU7 478 aaKnown RBP12.6□□□□□ -0.39
SCRN3-212ENST00000548868 DACT1Q9NYF0 836 aa12.6□□□□□ -0.39
SCRN3-212ENST00000548868 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 IGSF9BQ9UPX0 1349 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 A0A087X0B3 334 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 DYNC1LI2O43237 492 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 MSCO60682 206 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 LGR5O75473 907 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 PLCG1P19174 1290 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 CLCN1P35523 988 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 TCF7P36402 384 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 CYP4A11Q02928 519 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 CTTNQ14247 550 aaKnown RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 ZRSR1Q15695 479 aaKnown RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 E2F4Q16254 413 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 GLIPR1L2Q4G1C9 344 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 BRDTQ58F21 947 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 GJC2Q5T442 439 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 KANK3Q6NY19 840 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 TPH2Q8IWU9 490 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 C4orf19Q8IY42 314 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 DHX58Q96C10 678 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 NACC1Q96RE7 527 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 LXNQ9BS40 222 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
SCRN3-212ENST00000548868 ZNF302Q9NR11 478 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 RGL1Q9NZL6 768 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 GABBR1Q9UBS5 961 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 KIAA1024Q9UPX6 916 aa12.59□□□□□ -0.39
SCRN3-212ENST00000548868 KAT6AQ92794 2004 aa12.58□□□□□ -0.39
SCRN3-212ENST00000548868 A6NJR5 290 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 BACH1O14867 736 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 SLFN14P0C7P3 912 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 RARBP10826 455 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
SCRN3-212ENST00000548868 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
SCRN3-212ENST00000548868 CPT1AP50416 773 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 SLC26A2P50443 739 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 GJA9P57773 515 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 NKX3-2P78367 333 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 ECM1Q16610 540 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 SWSAP1Q6NVH7 229 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.4
SCRN3-212ENST00000548868 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
SCRN3-212ENST00000548868 PLPPR4Q7Z2D5 763 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms