RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 STPG3Q8N7X2 389 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 JMYQ8N9B5 988 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 WWC2-AS2Q96NR7 200 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 PTPN18Q99952 460 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 CD244Q9BZW8 370 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 TANGO6Q9C0B7 1094 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 ARHGAP20Q9P2F6 1191 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 ZFP69BQ9UJL9 534 aa6.39□□□□□ -1.39
CCDC38-206ENST00000548771 PATE3B3GLJ2 98 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 U2SURPO15042 1029 aaKnown RBP6.38□□□□□ -1.39
CCDC38-206ENST00000548771 C6P13671 934 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 CSF2RBP32927 897 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 GPR19Q15760 415 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 SLFN13Q68D06 897 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 ARHGAP36Q6ZRI8 547 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 ZFPM1Q8IX07 1006 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
CCDC38-206ENST00000548771 DHRS4Q9BTZ2 278 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 MENTQ9BUN1 341 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 ST6GALNAC2Q9UJ37 374 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 CBLCQ9ULV8 474 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 ZDHHC9Q9Y397 364 aa6.38□□□□□ -1.39
CCDC38-206ENST00000548771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.37□□□□□ -1.39
CCDC38-206ENST00000548771 FAM221BA6H8Z2 402 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 NPEPPSL1A6NEC2 478 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 MAN2B1O00754 1011 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
CCDC38-206ENST00000548771 PTPN1P18031 435 aaKnown RBP6.37□□□□□ -1.39
CCDC38-206ENST00000548771 GLRBP48167 497 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 GABREP78334 506 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 LACTBP83111 547 aaPredicted RBP6.37□□□□□ -1.39
CCDC38-206ENST00000548771 ARHGEF18Q6ZSZ5 1173 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 SPRED1Q7Z699 444 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 OSTM1Q86WC4 334 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 NLGN4XQ8N0W4 816 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 FBXW5Q969U6 566 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 CDC6Q99741 560 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 MRIQ9BWK5 157 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 SLC4A7Q9Y6M7 1214 aa6.37□□□□□ -1.39
CCDC38-206ENST00000548771 ZNF561-AS1K7EIQ3 104 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 PYGMP11217 842 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 PDE6AP16499 860 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 R3HDM1Q15032 1099 aaKnown RBP6.36□□□□□ -1.39
CCDC38-206ENST00000548771 BTBD8Q5XKL5 378 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 REXO1L1PQ8IX06 675 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
CCDC38-206ENST00000548771 SEC61A2Q9H9S3 476 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 MRPS23Q9Y3D9 190 aaKnown RBP6.36□□□□□ -1.39
CCDC38-206ENST00000548771 TSC22D4Q9Y3Q8 395 aa6.36□□□□□ -1.39
CCDC38-206ENST00000548771 KDM2BQ8NHM5 1336 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 FBXO21O94952 628 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 C4BPAP04003 597 aaKnown RBP6.35□□□□□ -1.39
CCDC38-206ENST00000548771 JAM2P57087 298 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 GUCY1A3Q02108 690 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 ZC3H12BQ5HYM0 836 aaKnown RBP6.35□□□□□ -1.39
CCDC38-206ENST00000548771 MTDHQ86UE4 582 aaKnown RBP6.35□□□□□ -1.39
CCDC38-206ENST00000548771 CIR1Q86X95 450 aaPredicted RBP6.35□□□□□ -1.39
CCDC38-206ENST00000548771 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 TACO1Q9BSH4 297 aaKnown RBP6.35□□□□□ -1.39
CCDC38-206ENST00000548771 SMURF1Q9HCE7 757 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 SLC39A2Q9NP94 309 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 PCDHA9Q9Y5H5 950 aa6.35□□□□□ -1.39
CCDC38-206ENST00000548771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.34□□□□□ -1.39
CCDC38-206ENST00000548771 H0Y858 1186 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 CLASP2O75122 1294 aaKnown RBP6.34□□□□□ -1.39
CCDC38-206ENST00000548771 CRTAMO95727 393 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 NAT1P18440 290 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 TOP3AQ13472 1001 aaPredicted RBP6.34□□□□□ -1.39
CCDC38-206ENST00000548771 TRIM61Q5EBN2 209 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 FIGNQ5HY92 759 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 RALYLQ86SE5 291 aaKnown RBP6.34□□□□□ -1.39
CCDC38-206ENST00000548771 CHST13Q8NET6 341 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
CCDC38-206ENST00000548771 MKL1Q969V6 931 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 KLC2Q9H0B6 622 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 BTBD7Q9P203 1132 aa6.34□□□□□ -1.39
CCDC38-206ENST00000548771 CCDC85CA6NKD9 419 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 KCNQ2O43526 872 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 POLD1P28340 1107 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 GJA4P35212 333 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 GTF2F1P35269 517 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC38-206ENST00000548771 SEC23AQ15436 765 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 STILQ15468 1287 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 PTRH1Q86Y79 214 aaKnown RBP6.33□□□□□ -1.4
CCDC38-206ENST00000548771 Q8TCH9 128 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 SLC52A2Q9HAB3 445 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 CATSPERZQ9NTU4 200 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 SNTG2Q9NY99 539 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 ATP23Q9Y6H3 246 aa6.33□□□□□ -1.4
CCDC38-206ENST00000548771 MPIG6BO95866 241 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 ZNF888P0CJ79 500 aaPredicted RBP6.32□□□□□ -1.4
CCDC38-206ENST00000548771 KCNA6P17658 529 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 TACR2P21452 398 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 AOAHP28039 575 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 HERVK_113P62684 666 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 CRY1Q16526 586 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 SLC7A14Q8TBB6 771 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 SCLYQ96I15 445 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms