RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 BANK1Q8NDB2 785 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 PXYLP1Q8TE99 480 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 SPATA33Q96N06 139 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 TELO2Q9Y4R8 837 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 TRIM17Q9Y577 477 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 SUPT20HL2P0C7V6 817 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 CYBAP13498 195 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 ELNP15502 786 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 CAMK4Q16566 473 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 LRRC15Q8TF66 581 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 TNMDQ9H2S6 317 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 MAGEF1Q9HAY2 307 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 FAM184BQ9ULE4 1060 aa32.21■■■□□ 2.75
BRF1-213ENST00000548421 NOP56O00567 594 aaKnown RBP32.2■■■□□ 2.75
BRF1-213ENST00000548421 HMGCRP04035 888 aa32.2■■■□□ 2.75
BRF1-213ENST00000548421 QARSP47897 775 aaKnown RBP32.2■■■□□ 2.75
BRF1-213ENST00000548421 GJC2Q5T442 439 aaPredicted RBP32.2■■■□□ 2.75
BRF1-213ENST00000548421 ELOA2Q8IYF1 753 aaPredicted RBP32.2■■■□□ 2.75
BRF1-213ENST00000548421 SEPT1Q8WYJ6 367 aa32.2■■■□□ 2.75
BRF1-213ENST00000548421 ZSWIM4Q9H7M6 989 aa32.2■■■□□ 2.75
BRF1-213ENST00000548421 CTAGE5O15320 804 aa32.19■■■□□ 2.74
BRF1-213ENST00000548421 HSDL1Q3SXM5 330 aa32.19■■■□□ 2.74
BRF1-213ENST00000548421 GPR20Q99678 358 aa32.19■■■□□ 2.74
BRF1-213ENST00000548421 BLOC1S4Q9NUP1 217 aa32.19■■■□□ 2.74
BRF1-213ENST00000548421 HOOK1Q9UJC3 728 aaKnown RBP32.19■■■□□ 2.74
BRF1-213ENST00000548421 GSTTP1A0A1W2PQM5 241 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 ADCY6O43306 1168 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 AKR1A1P14550 325 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 HTTP42858 3142 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 PSMC5P62195 406 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 KCNK18Q7Z418 384 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 TRPV1Q8NER1 839 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 LARP4BQ92615 738 aaKnown RBP32.18■■■□□ 2.74
BRF1-213ENST00000548421 RAD54LQ92698 747 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 DNM3Q9UQ16 869 aa32.18■■■□□ 2.74
BRF1-213ENST00000548421 PTGS1P23219 599 aa32.17■■■□□ 2.74
BRF1-213ENST00000548421 CACNB2Q08289 660 aaPredicted RBP32.17■■■□□ 2.74
BRF1-213ENST00000548421 TRIM32Q13049 653 aa32.17■■■□□ 2.74
BRF1-213ENST00000548421 CCDC60Q8IWA6 550 aaPredicted RBP32.17■■■□□ 2.74
BRF1-213ENST00000548421 SLAIN1Q8ND83 568 aa32.17■■■□□ 2.74
BRF1-213ENST00000548421 ATP6V0A1Q93050 837 aa32.17■■■□□ 2.74
BRF1-213ENST00000548421 WRAP73Q9P2S5 460 aaPredicted RBP32.17■■■□□ 2.74
BRF1-213ENST00000548421 GABBR1Q9UBS5 961 aa32.17■■■□□ 2.74
BRF1-213ENST00000548421 GNEQ9Y223 722 aaKnown RBP32.17■■■□□ 2.74
BRF1-213ENST00000548421 IGKV6D-21A0A0A0MT36 114 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 BACH1O14867 736 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 DKC1O60832 514 aaKnown RBP eCLIP32.16■■■□□ 2.74
BRF1-213ENST00000548421 TCF7P36402 384 aaPredicted RBP32.16■■■□□ 2.74
BRF1-213ENST00000548421 UGCGQ16739 394 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 SWSAP1Q6NVH7 229 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 OR6J1Q8NGC5 347 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 PPTC7Q8NI37 304 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 PAGE5Q96GU1 130 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 NACC1Q96RE7 527 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 IGSF9BQ9UPX0 1349 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 E9PMD0 336 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 LYPLA2O95372 231 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 PRKAR2AP13861 404 aaKnown RBP32.16■■■□□ 2.74
BRF1-213ENST00000548421 SH3RF1Q7Z6J0 888 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 ZNF302Q9NR11 478 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 KBTBD4Q9NVX7 518 aa32.16■■■□□ 2.74
BRF1-213ENST00000548421 CENPFP49454 3210 aa32.15■■■□□ 2.74
BRF1-213ENST00000548421 PSMC6P62333 389 aa32.15■■■□□ 2.74
BRF1-213ENST00000548421 C4orf19Q8IY42 314 aa32.15■■■□□ 2.74
BRF1-213ENST00000548421 Q9Y3F1 56 aa32.15■■■□□ 2.74
BRF1-213ENST00000548421 AFMP43652 599 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 POSTNQ15063 836 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 FAM160B1Q5W0V3 765 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 SV2BQ7L1I2 683 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 TLK2Q86UE8 772 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 GRAMD1CQ8IYS0 662 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 PTCH2Q9Y6C5 1203 aa32.14■■■□□ 2.74
BRF1-213ENST00000548421 FOXN1O15353 648 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 LETM1O95202 739 aaPredicted RBP32.13■■■□□ 2.73
BRF1-213ENST00000548421 PLA2G4BP0C869 781 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 MDM2Q00987 491 aaPredicted RBP32.13■■■□□ 2.73
BRF1-213ENST00000548421 MCM6Q14566 821 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 ZSCAN23Q3MJ62 389 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 MAP3K21Q5TCX8 1036 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 AFAP1L1Q8TED9 768 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 AFG1LQ8WV93 481 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 MTRQ99707 1265 aa32.13■■■□□ 2.73
BRF1-213ENST00000548421 GZF1Q9H116 711 aaPredicted RBP32.13■■■□□ 2.73
BRF1-213ENST00000548421 MAFBQ9Y5Q3 323 aaPredicted RBP32.13■■■□□ 2.73
BRF1-213ENST00000548421 EMSYQ7Z589 1322 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.12■■■□□ 2.73
BRF1-213ENST00000548421 SEPT4O43236 478 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 LGR5O75473 907 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 EYA4O95677 639 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 AMPD3Q01432 767 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 RBM43Q6ZSC3 357 aaKnown RBP32.12■■■□□ 2.73
BRF1-213ENST00000548421 PIGOQ8TEQ8 1089 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 STAMQ92783 540 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 LENG1Q96BZ8 264 aaPredicted RBP32.12■■■□□ 2.73
BRF1-213ENST00000548421 PCYT2Q99447 389 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 AZI2Q9H6S1 392 aa32.12■■■□□ 2.73
BRF1-213ENST00000548421 A0A087WWV3 80 aa32.11■■■□□ 2.73
BRF1-213ENST00000548421 DYNC1LI2O43237 492 aaPredicted RBP32.11■■■□□ 2.73
BRF1-213ENST00000548421 HSPA8P11142 646 aaKnown RBP32.11■■■□□ 2.73
BRF1-213ENST00000548421 CNGA1P29973 690 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms