RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
SVOP-202ENST00000548229 MRPL42Q9Y6G3 142 aaKnown RBP18.28■□□□□ 0.52
SVOP-202ENST00000548229 SRGAP2BP0DMP2 458 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 UBE3AQ05086 875 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 PPFIA1Q13136 1202 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 TNPO1Q92973 898 aaKnown RBP18.27■□□□□ 0.52
SVOP-202ENST00000548229 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
SVOP-202ENST00000548229 RPGRIP1Q96KN7 1286 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 CDCA3Q99618 268 aaPredicted RBP18.27■□□□□ 0.52
SVOP-202ENST00000548229 MAD2L2Q9UI95 211 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 TUBE1Q9UJT0 475 aa18.27■□□□□ 0.52
SVOP-202ENST00000548229 FRMPD4Q14CM0 1322 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 VPS13AQ96RL7 3174 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 PALM3A6NDB9 673 aaPredicted RBP18.26■□□□□ 0.51
SVOP-202ENST00000548229 PROB1E7EW31 1015 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 DNAJB1P25685 340 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 PDE12Q6L8Q7 609 aaKnown RBP18.26■□□□□ 0.51
SVOP-202ENST00000548229 RUFY4Q6ZNE9 571 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 ADGRD2Q7Z7M1 963 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
SVOP-202ENST00000548229 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 ASIC4Q96FT7 647 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 RIOX1Q9H6W3 641 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 AAASQ9NRG9 546 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 ERAP1Q9NZ08 941 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 BARX2Q9UMQ3 279 aaPredicted RBP18.26■□□□□ 0.51
SVOP-202ENST00000548229 PCDHB12Q9Y5F1 795 aa18.26■□□□□ 0.51
SVOP-202ENST00000548229 PNMA6FA0A0J9YX94 578 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 MBLAC1A4D2B0 266 aaPredicted RBP18.25■□□□□ 0.51
SVOP-202ENST00000548229 M0QZ92 97 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 SDSP20132 328 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 MRPS6P82932 125 aaKnown RBP18.25■□□□□ 0.51
SVOP-202ENST00000548229 GRIK4Q16099 956 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 PTPN21Q16825 1174 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 CRIPAKQ8N1N5 446 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 SUSD6Q92537 303 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 FAM86C1Q9NVL1 165 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 RTEL1Q9NZ71 1219 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 LRFN2Q9ULH4 789 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 CDY2AQ9Y6F7 541 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 WDR87Q6ZQQ6 2873 aa18.25■□□□□ 0.51
SVOP-202ENST00000548229 RRN3P2A6NIE6 340 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 GLP2RO95838 553 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 TCF7P36402 384 aaPredicted RBP18.24■□□□□ 0.51
SVOP-202ENST00000548229 VCPP55072 806 aaKnown RBP18.24■□□□□ 0.51
SVOP-202ENST00000548229 SP4Q02446 784 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 SEMA3FQ13275 785 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 PCNX4Q63HM2 1172 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 SEPT1Q8WYJ6 367 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 CUL5Q93034 780 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 PIGSQ96S52 555 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 SMARCAD1Q9H4L7 1026 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 DMDP11532 3685 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 KMT2EQ8IZD2 1858 aa18.24■□□□□ 0.51
SVOP-202ENST00000548229 FAM186AA6NE01 2351 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 HIP1O00291 1037 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 SCG2P13521 617 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 CD52P31358 61 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 ATP8B4Q8TF62 1192 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 GLG1Q92896 1179 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 RIPOR3Q96MK2 946 aa18.23■□□□□ 0.51
SVOP-202ENST00000548229 AGO3Q9H9G7 860 aaKnown RBP18.23■□□□□ 0.51
SVOP-202ENST00000548229 SEC23AQ15436 765 aa18.22■□□□□ 0.51
SVOP-202ENST00000548229 PAN2Q504Q3 1202 aaKnown RBP18.22■□□□□ 0.51
SVOP-202ENST00000548229 RTN4RL1Q86UN2 441 aaPredicted RBP18.22■□□□□ 0.51
SVOP-202ENST00000548229 SMARCC2Q8TAQ2 1214 aa18.22■□□□□ 0.51
SVOP-202ENST00000548229 TLR9Q9NR96 1032 aa18.22■□□□□ 0.51
SVOP-202ENST00000548229 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
SVOP-202ENST00000548229 NR2E1Q9Y466 385 aa18.22■□□□□ 0.51
SVOP-202ENST00000548229 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
SVOP-202ENST00000548229 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 H0Y858 1186 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 GALR2O43603 387 aaPredicted RBP18.21■□□□□ 0.51
SVOP-202ENST00000548229 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 TRDNQ13061 729 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 PAK2Q13177 524 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 GRM4Q14833 912 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 MARCH8Q5T0T0 291 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 SPOUT1Q5T280 376 aaKnown RBP18.21■□□□□ 0.51
SVOP-202ENST00000548229 CWC27Q6UX04 472 aaKnown RBP18.21■□□□□ 0.51
SVOP-202ENST00000548229 TMEM184AQ6ZMB5 413 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 ERMP1Q7Z2K6 904 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 UBALD2Q8IYN6 164 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 LINC01599Q8WXQ3 324 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 GPRASP2Q96D09 838 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 PADI3Q9ULW8 664 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 PCDHB7Q9Y5E2 793 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 TRPV2Q9Y5S1 764 aa18.21■□□□□ 0.51
SVOP-202ENST00000548229 ERICH2A1L162 156 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 PIK3CDO00329 1044 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 PER2O15055 1255 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 MAFGO15525 162 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms